RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 LOC102724200A0A096LPH7 203 aaPredicted RBP16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 IGLV2-23P01705 113 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 CRYGBP07316 175 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 ZBTB25P24278 435 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 LINC00205P59089 165 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 TNFRSF9Q07011 255 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 WFDC3Q8IUB2 231 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 SETD6Q8TBK2 473 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 PTX4Q96A99 478 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 PHB2Q99623 299 aa16.02■□□□□ 0.16
CNEP1R1-201ENST00000389134 A0A0J9YWU9 116 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 A0A1W2PPK0 400 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 RBMXL2O75526 392 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 FOLR2P14207 255 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 DCKP27707 260 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 C6orf201Q7Z4U5 140 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 NKAIN3Q8N8D7 197 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 ADAD2Q8NCV1 583 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 GATAD1Q8WUU5 269 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 WDR89Q96FK6 387 aaPredicted RBP16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 SLC35D1Q9NTN3 355 aa16.01■□□□□ 0.15
CNEP1R1-201ENST00000389134 C2orf70A6NJV1 201 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 FAM223BA6NKX1 122 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 DEDDO75618 318 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 OR9G9P0C7N8 305 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 ATF4P18848 351 aaPredicted RBP16■□□□□ 0.15
CNEP1R1-201ENST00000389134 ATP5G2Q06055 141 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 EXOSC2Q13868 293 aaKnown RBP16■□□□□ 0.15
CNEP1R1-201ENST00000389134 LGALS9CQ6DKI2 356 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 FAM223AQ8IWN6 122 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 THRSPQ92748 146 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 SLC29A1Q99808 456 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 RIMS4Q9H426 269 aaPredicted RBP16■□□□□ 0.15
CNEP1R1-201ENST00000389134 OR1A1Q9P1Q5 309 aa16■□□□□ 0.15
CNEP1R1-201ENST00000389134 ZNF230Q9UIE0 474 aaPredicted RBP16■□□□□ 0.15
CNEP1R1-201ENST00000389134 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 MSGN1A6NI15 193 aa15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 TUSC2O75896 110 aa15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 LALBAP00709 142 aa15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 RHOGP84095 191 aa15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 EWSR1Q01844 656 aaKnown RBP eCLIP15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 FAM209BQ5JX69 171 aa15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 PGLYRP3Q96LB9 341 aa15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 AKIP1Q9NQ31 210 aa15.99■□□□□ 0.15
CNEP1R1-201ENST00000389134 TRBV6-6A0A0A6YYG2 114 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 UBBP0CG47 229 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 APELAP0DMC3 54 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 LYG2Q86SG7 212 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 APH1BQ8WW43 257 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 HARBI1Q96MB7 349 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 MGAT4AQ9UM21 535 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 TP53TG1Q9Y2A0 90 aa15.98■□□□□ 0.15
CNEP1R1-201ENST00000389134 M0R1X1 148 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 DYNC1I1O14576 645 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 BMI1P35226 326 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 RPS27AP62979 156 aaKnown RBP15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 ANKRD55Q3KP44 614 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 CBR4Q8N4T8 237 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 OR52B4Q8NGK2 314 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 KCNG3Q8TAE7 436 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 DERL3Q96Q80 235 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 TMEM59Q9BXS4 323 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 DNAH6Q9C0G6 4158 aa15.97■□□□□ 0.15
CNEP1R1-201ENST00000389134 TRBV9A0A0B4J1U6 114 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 LOC100130705A0A1B0GUX0 176 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 IRGMA1A4Y4 181 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 LGALS9O00182 355 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 MPPED1O15442 326 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 MYL12AP19105 171 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 HTR2CP28335 458 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 HLA-DRB3P79483 266 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 CBX3Q13185 183 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 ZNF57Q68EA5 555 aaPredicted RBP15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 Q6ZWC4 215 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 ZFP41Q8N8Y5 198 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 PLEKHJ1Q9NW61 149 aa15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 EXOSC1Q9Y3B2 195 aaKnown RBP15.96■□□□□ 0.15
CNEP1R1-201ENST00000389134 SHOXO15266 292 aa15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 EDN2P20800 178 aa15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 CBLN1P23435 193 aa15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 MAP2K4P45985 399 aa15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 RASSF2P50749 326 aa15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 TAGLNQ01995 201 aaKnown RBP15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 OR10K2Q6IF99 312 aa15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 TM2D1Q9BX74 207 aa15.95■□□□□ 0.14
CNEP1R1-201ENST00000389134 VPS13DQ5THJ4 4388 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 SPRY2O43597 315 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 GGCTO75223 188 aaKnown RBP15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 PRH1P02810 166 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 SCTP09683 121 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 SMN1Q16637 294 aaKnown RBP15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 MRGPRG-AS1Q2M3A8 158 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 TMEM177Q53S58 311 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 TMEM61Q8N0U2 210 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 TMEM217Q8N7C4 229 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 NECAP1Q8NC96 275 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 PYDC1Q8WXC3 89 aa15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 SRSF12Q8WXF0 261 aaKnown RBP15.94■□□□□ 0.14
CNEP1R1-201ENST00000389134 NICN1Q9BSH3 213 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms