RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 TSSC4Q9Y5U2 329 aaPredicted RBP9.06□□□□□ -0.96
APOBEC3F-202ENST00000381565 IGKV1D-13A0A0B4J2D9 117 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 ATP6V0E1O15342 81 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 XRCC3O43542 346 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 IGLV2-14P01704 120 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 PRB2P02812 416 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 IGF1P05019 195 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 EIF4EP06730 217 aaKnown RBP9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 IGKV1-13P0DP09 117 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 NFYAP23511 347 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 MC5RP33032 325 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 CNIH2Q6PI25 160 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 ETV3LQ6ZN32 361 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 LCNL1Q6ZST4 164 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 OR4F17Q8NGA8 305 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 DDB2Q92466 427 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 SNAPC3Q92966 411 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 OR4F4Q96R69 305 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 ANXA10Q9UJ72 324 aa9.05□□□□□ -0.96
APOBEC3F-202ENST00000381565 LINC00473A8K010 186 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 H7C2Y5 167 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 RRHO14718 337 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 RBBP9O75884 186 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 TUSC2O75896 110 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 HLA-DQB1P01920 261 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 TAS2R20P59543 309 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 RPL23AP62750 156 aaKnown RBP9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 PSG5Q15238 335 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 C19orf54Q5BKX5 351 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 KHDC1LQ5JSQ8 128 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 HOGA1Q86XE5 327 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 PDPNQ86YL7 162 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 RNF152Q8N8N0 203 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 BEST4Q8NFU0 473 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 OR51J1Q9H342 316 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 TPSG1Q9NRR2 321 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 ANAPC10Q9UM13 185 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 OR2W1Q9Y3N9 320 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 DNAH9Q9NYC9 4486 aa9.04□□□□□ -0.96
APOBEC3F-202ENST00000381565 MEIS3P1A6NDR6 274 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 G3V318 75 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 FCN1O00602 326 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 IGHG4P01861 327 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 APOA2P02652 100 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 FCER2P06734 321 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 DUTP33316 252 aaKnown RBP9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 CRIP2P52943 208 aaPredicted RBP9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 SLC35B1P78383 322 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 GPR107Q5VW38 600 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 COMMD1Q8N668 190 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 ZNF645Q8N7E2 425 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 RNF5Q99942 180 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 PARP11Q9NR21 331 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 DIABLOQ9NR28 239 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 SLC35D1Q9NTN3 355 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 KIAA1456Q9P272 454 aa9.03□□□□□ -0.96
APOBEC3F-202ENST00000381565 COL7A1Q02388 2944 aa9.02□□□□□ -0.96
APOBEC3F-202ENST00000381565 J3QRK9 145 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 SPDEFO95238 335 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 CTXN2P0C2S0 81 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 PF4V1P10720 104 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 EGR2P11161 476 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 PSMB8P28062 276 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 THBS3P49746 956 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 RPL30P62888 115 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 FOXE3Q13461 319 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 MRGPRG-AS1Q2M3A8 158 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 TMEM177Q53S58 311 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 TMEM69Q5SWH9 247 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 LIN54Q6MZP7 749 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 TEX38Q6PEX7 206 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 BVESQ8NE79 360 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 MYOZ3Q8TDC0 251 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 S100A16Q96FQ6 103 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 COMMD3Q9UBI1 195 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 METTL1Q9UBP6 276 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 RBM7Q9Y580 266 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 WSB1Q9Y6I7 421 aa9.02□□□□□ -0.97
APOBEC3F-202ENST00000381565 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 SLC25A17O43808 307 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 SOX15O60248 233 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 HPGDSO60760 199 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 CA2P00918 260 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 IGLV1-40P01703 118 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 APOA1P02647 267 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 CRYGBP07316 175 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 ELANEP08246 267 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 ELK1P19419 428 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 VDAC1P21796 283 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 AADACP22760 399 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 LUMP51884 338 aaPredicted RBP9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 ARPC4P59998 168 aa9.01□□□□□ -0.97
APOBEC3F-202ENST00000381565 RPS16P62249 146 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms