RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HOGA1Q86XE5 327 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 H1FOOQ8IZA3 346 aaPredicted RBP7.32□□□□□ -1.24
HMGN1-202ENST00000380747 GVQW1Q8N7I0 195 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 Q8N9W7 124 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 BEST4Q8NFU0 473 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 OR8H1Q8NGG4 311 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 AP3S1Q92572 193 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 TOLLIPQ9H0E2 274 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 SCOCQ9UIL1 159 aa7.32□□□□□ -1.24
HMGN1-202ENST00000380747 MRPS7Q9Y2R9 242 aaKnown RBP7.32□□□□□ -1.24
HMGN1-202ENST00000380747 DNAH3Q8TD57 4116 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 SMIM31A0A1B0GVY4 71 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 OR5H14A6NHG9 310 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 H0YJW9 148 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 PROP1O75360 226 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 APOA1P02647 267 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 APOA2P02652 100 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 CD28P10747 220 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 NFYAP23511 347 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-202ENST00000380747 MC5RP33032 325 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 SOX6P35712 828 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 CBX5P45973 191 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 LINC00205P59089 165 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 ACTBP60709 375 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 SPCS2Q15005 226 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 CNIH2Q6PI25 160 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 SNX29P2Q8IUI4 249 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-202ENST00000380747 OR5AU1Q8NGC0 362 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 RAB2BQ8WUD1 216 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 RITA1Q96K30 269 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 CMTM3Q96MX0 182 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 MMP27Q9H306 513 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 IFT46Q9NQC8 304 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 PLSCR3Q9NRY6 295 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 LIN7CQ9NUP9 197 aaKnown RBP7.31□□□□□ -1.24
HMGN1-202ENST00000380747 SDHAF2Q9NX18 166 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 LINC00527Q9UJ94 153 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 WASHC3Q9Y3C0 194 aa7.31□□□□□ -1.24
HMGN1-202ENST00000380747 PSMB11A5LHX3 300 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 NBR2O15453 112 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 ELK1P19419 428 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 CNTFRP26992 372 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 PRSS3P35030 304 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 LUMP51884 338 aaPredicted RBP7.3□□□□□ -1.24
HMGN1-202ENST00000380747 TMBIM6P55061 237 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 NSUN5P1Q3KNT7 163 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 FOXRED2Q8IWF2 684 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 ZNF383Q8NA42 475 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 OR5AN1Q8NGI8 311 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 NOL4LQ96MY1 436 aaPredicted RBP7.3□□□□□ -1.24
HMGN1-202ENST00000380747 CITED2Q99967 270 aaPredicted RBP7.3□□□□□ -1.24
HMGN1-202ENST00000380747 NECAP2Q9NVZ3 263 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 KIAA1456Q9P272 454 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 EXTL2Q9UBQ6 330 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 ZNF107Q9UII5 783 aaPredicted RBP7.3□□□□□ -1.24
HMGN1-202ENST00000380747 GAB2Q9UQC2 676 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 OR2W1Q9Y3N9 320 aa7.3□□□□□ -1.24
HMGN1-202ENST00000380747 TENM3Q9P273 2699 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 A0A1W2PRX2 142 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 CCDC160A6NGH7 325 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 LINC01548A6NM66 108 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 RBBP9O75884 186 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 TSPAN15O95858 294 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 IGHG2P01859 326 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 HLA-DQB1P01920 261 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 CSF1P09603 554 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 OR5H8P0DN80 308 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 THBS3P49746 956 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 RPS16P62249 146 aaKnown RBP7.29□□□□□ -1.24
HMGN1-202ENST00000380747 CBX3Q13185 183 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 CDK10Q15131 360 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 PLGLAQ15195 96 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 C2orf68Q2NKX9 166 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 KHDC1LQ5JSQ8 128 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 LIN54Q6MZP7 749 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 C10orf99Q6UWK7 81 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 ZNF329Q86UD4 541 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 PDPNQ86YL7 162 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 FAM71E2Q8N5Q1 922 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 OR4X2Q8NGF9 303 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 FAM110DQ8TAY7 271 aaPredicted RBP7.29□□□□□ -1.24
HMGN1-202ENST00000380747 CHPT1Q8WUD6 406 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 SNAPC3Q92966 411 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 ISOC1Q96CN7 298 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 FLYWCH2Q96CP2 140 aaKnown RBP7.29□□□□□ -1.24
HMGN1-202ENST00000380747 C5orf30Q96GV9 206 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 BCL7BQ9BQE9 202 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 HSPB9Q9BQS6 159 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 SLC35D1Q9NTN3 355 aa7.29□□□□□ -1.24
HMGN1-202ENST00000380747 IGKV1D-13A0A0B4J2D9 117 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 TCRBV4S1A1TA0A5B7 111 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 H3BMQ9 156 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 AP4M1O00189 453 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 RRHO14718 337 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 RGS5O15539 181 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 TUSC2O75896 110 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 NDUFA3O95167 84 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 PMP2P02689 132 aa7.28□□□□□ -1.24
HMGN1-202ENST00000380747 IGKV1-16P04430 117 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms