RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FGF16O43320 207 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 CD3DP04234 171 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 MDKP21741 143 aaPredicted RBP14.92□□□□□ -0.02
SSU72-203ENST00000378725 THBS3P49746 956 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 F2RL1P55085 397 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 TAS2R19P59542 299 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 TAGLNQ01995 201 aaKnown RBP14.92□□□□□ -0.02
SSU72-203ENST00000378725 ZNF79Q15937 498 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 CNPY1Q3B7I2 92 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 C5orf56Q8N8D9 126 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 ZBTB34Q8NCN2 500 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 DDB2Q92466 427 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 MOB3AQ96BX8 217 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 ADTRPQ96IZ2 230 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 RNF5Q99942 180 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 PRSS22Q9GZN4 317 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 TAS2R8Q9NYW2 309 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 WASHC3Q9Y3C0 194 aa14.92□□□□□ -0.02
SSU72-203ENST00000378725 M0QYG6 137 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 TSPAN5P62079 268 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 RNASE10Q5GAN6 216 aaKnown RBP14.91□□□□□ -0.02
SSU72-203ENST00000378725 SPANXN2Q5MJ10 180 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 Q6ZS46 218 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 Q8N9W7 124 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 SECTM1Q8WVN6 248 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 THAP7Q9BT49 309 aaPredicted RBP14.91□□□□□ -0.02
SSU72-203ENST00000378725 TINAGL1Q9GZM7 467 aaPredicted RBP14.91□□□□□ -0.02
SSU72-203ENST00000378725 SLC5A7Q9GZV3 580 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 CCL28Q9NRJ3 127 aa14.91□□□□□ -0.02
SSU72-203ENST00000378725 LINC00473A8K010 186 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 CSF1P09603 554 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 GNRHRP30968 328 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 FXYD4P59646 89 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 HERV-K104P61576 105 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 PYDC2Q56P42 97 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 STEAP1BQ6NZ63 245 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 PDPNQ86YL7 162 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 NPBQ8NG41 125 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 SPATA3Q8NHX4 192 aa14.9□□□□□ -0.02
SSU72-203ENST00000378725 HSD17B10Q99714 261 aaKnown RBP14.9□□□□□ -0.02
SSU72-203ENST00000378725 ANKRD20A5PA0PJZ0 165 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 NCBP2LA6PVI3 153 aaKnown RBP14.89□□□□□ -0.03
SSU72-203ENST00000378725 H7C2Y5 167 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 RAB3DO95716 219 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 APOA2P02652 100 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 IGKV1-16P04430 117 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 RRASP10301 218 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 UCP3P55916 312 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 ABCA11PQ4W5N1 156 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 ZNF66Q6ZN08 573 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 LINC00299Q6ZSB3 139 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 ARRDC1Q8N5I2 433 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 FAM71E2Q8N5Q1 922 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 OR4D10Q8NGI6 311 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 OR2T6Q8NHC8 308 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 SLC35D1Q9NTN3 355 aa14.89□□□□□ -0.03
SSU72-203ENST00000378725 IFNA6P05013 189 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 ZNF735P0CB33 412 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 PROK1P58294 105 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 RPL30P62888 115 aaKnown RBP14.88□□□□□ -0.03
SSU72-203ENST00000378725 AADACL3Q5VUY0 350 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 C12orf54Q6X4T0 127 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 ZNF818PQ6ZRF7 136 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 LHFPL1Q86WI0 220 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 TMEM17Q86X19 198 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 Q8N402 240 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 MFSD4AQ8N468 514 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 BVESQ8NE79 360 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 BORCS5Q969J3 196 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 FLYWCH2Q96CP2 140 aaKnown RBP14.88□□□□□ -0.03
SSU72-203ENST00000378725 SRRQ9GZT4 340 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 FXYD6Q9H0Q3 95 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 SERTAD4Q9NUC0 356 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 LIN7CQ9NUP9 197 aaKnown RBP14.88□□□□□ -0.03
SSU72-203ENST00000378725 SIGLEC9Q9Y336 463 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 RNF114Q9Y508 228 aa14.88□□□□□ -0.03
SSU72-203ENST00000378725 NBR2O15453 112 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 NDUFA3O95167 84 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 AKAIN1P0CW23 69 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 CNTFRP26992 372 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 MEF2DQ14814 521 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 MMDQ15546 238 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 TMEM177Q53S58 311 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 LPCAT3Q6P1A2 487 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 TRIM63Q969Q1 353 aa14.87□□□□□ -0.03
SSU72-203ENST00000378725 SH2D7A6NKC9 451 aaPredicted RBP14.86□□□□□ -0.03
SSU72-203ENST00000378725 LGALS7P47929 136 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 BRWD1-AS2P59051 145 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 RPS16P62249 146 aaKnown RBP14.86□□□□□ -0.03
SSU72-203ENST00000378725 ZNF45Q02386 682 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 RTL8BQ17RB0 113 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 KCTD9Q7L273 389 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 GDPD1Q8N9F7 314 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 TERB2Q8NHR7 220 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 RASL11BQ9BPW5 248 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 RSRP1Q9BUV0 290 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 PRELID3BQ9Y3B1 194 aa14.86□□□□□ -0.03
SSU72-203ENST00000378725 RRHO14718 337 aa14.85□□□□□ -0.03
SSU72-203ENST00000378725 IGHG2P01859 326 aa14.85□□□□□ -0.03
SSU72-203ENST00000378725 C5orf64Q2M2E5 130 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms