RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
TRIM13-202ENST00000378182 STHQ8IWL8 128 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 WNT2BQ93097 391 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 C10orf35Q96D05 121 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 TRGV2A0A075B6R0 118 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 LNP1A1A4G5 178 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 ANKRD20A5PA0PJZ0 165 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 GDF9O60383 454 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
TRIM13-202ENST00000378182 EFNB2P52799 333 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 ZNF418Q8TF45 676 aaPredicted RBP12.16□□□□□ -0.46
TRIM13-202ENST00000378182 SRXN1Q9BYN0 137 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 A0A1W2PPV9 198 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 C7orf71A4D174 169 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 RAB9AP51151 201 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 ZFP30Q9Y2G7 519 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 CEACAM4O75871 244 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 OR5AU1Q8NGC0 362 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 WFDC12Q8WWY7 111 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 CLEC7AQ9BXN2 247 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 WNT5BQ9H1J7 359 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 RALGAPA1Q6GYQ0 2036 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 FOXS1O43638 330 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 MDKP21741 143 aaPredicted RBP12.15□□□□□ -0.46
TRIM13-202ENST00000378182 TSPOP30536 169 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 CLPPQ16740 277 aaPredicted RBP12.15□□□□□ -0.46
TRIM13-202ENST00000378182 NUDT10Q8NFP7 164 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 NUDT11Q96G61 164 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 HIST1H4GQ99525 98 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 IGHV3-11P01762 117 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 KLF14Q8TD94 323 aaPredicted RBP12.15□□□□□ -0.46
TRIM13-202ENST00000378182 TBL2Q9Y4P3 447 aaKnown RBP12.15□□□□□ -0.46
TRIM13-202ENST00000378182 TCRBV4S1A1TA0A5B7 111 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
TRIM13-202ENST00000378182 GTSCR1Q86UQ5 136 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 COL22A1Q8NFW1 1626 aaPredicted RBP12.15□□□□□ -0.46
TRIM13-202ENST00000378182 DOCK3Q8IZD9 2030 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 IGKV1D-33P01593 117 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 IGKV1-33P01594 117 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 MFAP2P55001 183 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 ZNF415Q09FC8 603 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 ZPLD1Q8TCW7 415 aa12.15□□□□□ -0.46
TRIM13-202ENST00000378182 SRD5A1P18405 259 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 MGST3O14880 152 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 ALX3O95076 343 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 STAG3L2P0CL84 134 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 RCC1P18754 421 aaPredicted RBP12.14□□□□□ -0.47
TRIM13-202ENST00000378182 UQCC3Q6UW78 93 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 RFLNBQ8N5W9 214 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 DIRC3C9JPN6 131 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 PGA4P0DJD7 388 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 PGA5P0DJD9 388 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 PSG9Q00887 426 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 SAP25Q8TEE9 199 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 CHST5Q9GZS9 411 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 MUC21A0A0G2JKD1 596 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 MUC21A0A140T8X8 626 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 MESP2Q0VG99 397 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 MUC21Q5SSG8 566 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 C1orf53Q5VUE5 145 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 CHAC2Q8WUX2 184 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 F5P12259 2224 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 CENPVL1A0A0U1RR11 272 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 SYNGR3O43761 229 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 SFXN3Q9BWM7 321 aa12.14□□□□□ -0.47
TRIM13-202ENST00000378182 COL5A1-AS1Q5SY13 56 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 CLRN3Q8NCR9 226 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 NEU3Q9UQ49 428 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 CBY1Q9Y3M2 126 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 YLPM1P49750 1951 aaKnown RBP12.13□□□□□ -0.47
TRIM13-202ENST00000378182 IGF2P01344 180 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 CLEC19AQ6UXS0 136 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 ARFGEF1Q9Y6D6 1849 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 SRSF12Q8WXF0 261 aaKnown RBP12.13□□□□□ -0.47
TRIM13-202ENST00000378182 GALNT14Q96FL9 552 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 ABHD1Q96SE0 405 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 ST6GALNAC2Q9UJ37 374 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 PRR32B1ATL7 298 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 MOSP00540 346 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 C1QAP02745 245 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 COX6CP09669 75 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 A6NDN8 102 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 RBFOX2O43251 390 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIM13-202ENST00000378182 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
TRIM13-202ENST00000378182 FAM201AQ5SY85 155 aa12.13□□□□□ -0.47
TRIM13-202ENST00000378182 AWAT1Q58HT5 328 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 PQLC2Q6ZP29 291 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 HMGCLL1Q8TB92 370 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 MRPL30Q8TCC3 161 aaKnown RBP12.12□□□□□ -0.47
TRIM13-202ENST00000378182 MAP1LC3AQ9H492 121 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms