RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 MYCNOSP40205 109 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 CDX1P47902 265 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-203ENST00000376490 SCAND1P57086 179 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 RAX2Q96IS3 184 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 SLC35D1Q9NTN3 355 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 METTL1Q9UBP6 276 aaKnown RBP11.15□□□□□ -0.62
CLCN6-203ENST00000376490 SPATA2Q9UM82 520 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 FBXO7Q9Y3I1 522 aa11.15□□□□□ -0.62
CLCN6-203ENST00000376490 TRIM64CA6NLI5 447 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 APOA2P02652 100 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 OR5H8P0DN80 308 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-203ENST00000376490 NFYAP23511 347 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-203ENST00000376490 SLC6A1P30531 599 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 NDPQ00604 133 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 FOXB2Q5VYV0 432 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 ZNF660Q6AZW8 331 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-203ENST00000376490 PDPNQ86YL7 162 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 BVESQ8NE79 360 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
CLCN6-203ENST00000376490 P2RX4Q99571 388 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 NUBP2Q9Y5Y2 271 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 TNCP24821 2201 aa11.14□□□□□ -0.63
CLCN6-203ENST00000376490 CCL24O00175 119 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 IGLV1-40P01703 118 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 CTXN2P0C2S0 81 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 PTHLHP12272 177 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 KIAA0141Q14154 515 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-203ENST00000376490 CNIH2Q6PI25 160 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 MINDY2Q8NBR6 621 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 RCC1LQ96I51 464 aaKnown RBP11.13□□□□□ -0.63
CLCN6-203ENST00000376490 TSNAXQ99598 290 aaKnown RBP11.13□□□□□ -0.63
CLCN6-203ENST00000376490 FUNDC2Q9BWH2 189 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 DIABLOQ9NR28 239 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 ANXA10Q9UJ72 324 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 A3GALT2U3KPV4 340 aa11.13□□□□□ -0.63
CLCN6-203ENST00000376490 LINC00473A8K010 186 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 SLC25A17O43808 307 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 TMEM127O75204 238 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 HLA-DQB1P01920 261 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 FCER2P06734 321 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 DUTP33316 252 aaKnown RBP11.12□□□□□ -0.63
CLCN6-203ENST00000376490 RAB9AP51151 201 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 LUMP51884 338 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-203ENST00000376490 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 TMEM65Q6PI78 240 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 PPP1R27Q86WC6 154 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 CROCCP3Q8IVE0 287 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 ZNF491Q8N8L2 437 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 FAM103A1Q9BTL3 118 aaKnown RBP11.12□□□□□ -0.63
CLCN6-203ENST00000376490 AUNIPQ9H7T9 357 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 TPSG1Q9NRR2 321 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 NECAP2Q9NVZ3 263 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 OR2W1Q9Y3N9 320 aa11.12□□□□□ -0.63
CLCN6-203ENST00000376490 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 IGKV1D-13A0A0B4J2D9 117 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 A0A1W2PN81 502 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 A6NJ64 397 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
CLCN6-203ENST00000376490 SOX15O60248 233 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 CA2P00918 260 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 CRYGBP07316 175 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 IGKV1-13P0DP09 117 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 CHRNA7P36544 502 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 LGALS7P47929 136 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 CRIP2P52943 208 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-203ENST00000376490 RAB25P57735 213 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 NCS1P62166 190 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 TAGLNQ01995 201 aaKnown RBP11.11□□□□□ -0.63
CLCN6-203ENST00000376490 PJVKQ0ZLH3 352 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 TMEM177Q53S58 311 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 HOGA1Q86XE5 327 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 LFNGQ8NES3 379 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 BEST4Q8NFU0 473 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 MYOZ3Q8TDC0 251 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 DDB2Q92466 427 aa11.11□□□□□ -0.63
CLCN6-203ENST00000376490 S100A16Q96FQ6 103 aaKnown RBP11.11□□□□□ -0.63
CLCN6-203ENST00000376490 ARPC1BO15143 372 aaKnown RBP11.1□□□□□ -0.63
CLCN6-203ENST00000376490 SHOXO15266 292 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 XRCC3O43542 346 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 SPDEFO95238 335 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 DUS4LO95620 317 aaKnown RBP11.1□□□□□ -0.63
CLCN6-203ENST00000376490 IGLV2-14P01704 120 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 VBP1P61758 197 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 TMEM267Q0VDI3 215 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-203ENST00000376490 FXYD3Q14802 87 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 RTL8BQ17RB0 113 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 UNQ5815/PRO19632Q6UWF5 114 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 ZNF645Q8N7E2 425 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 SAMD12Q8N8I0 201 aa11.1□□□□□ -0.63
CLCN6-203ENST00000376490 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms