RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 ST6GALNAC6Q969X2 333 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 C11orf1Q9H5F2 150 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 LOC105371242A0A075B767 164 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 K7EPK0 472 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 LIPFP07098 398 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 CT45A6P0DMU7 189 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 CT45A5P0DMU8 189 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 CT45A7P0DMV0 189 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 DIAPH2-AS1Q14236 149 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 ESCO2Q56NI9 601 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 ABHD12Q8N2K0 398 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 FAM71E2Q8N5Q1 922 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 C10orf105Q8TEF2 133 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 POLQO75417 2590 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 IGHV2-26A0A0B4J1V2 119 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 A8MXK9 166 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 DEDDO75618 318 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 IGLV1-47P01700 117 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 ZNF137PP52743 207 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 ATP5J2P56134 94 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 CXorf66Q5JRM2 361 aaPredicted RBP12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 DMBX1Q8NFW5 382 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 RCL1Q9Y2P8 373 aaKnown RBP12.78□□□□□ -0.36
NIPAL3-204ENST00000374399 MSGN1A6NI15 193 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 RBFOX2O43251 390 aaKnown RBP eCLIP12.77□□□□□ -0.363e-10■■■■■ 36
NIPAL3-204ENST00000374399 FCGR3BO75015 233 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 SLC25A6P12236 298 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 G6PCP35575 357 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 S100A10P60903 97 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 ID3Q02535 119 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 TMUB2Q71RG4 321 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 FOXRED2Q8IWF2 684 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 RAB39BQ96DA2 213 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 PSMG3-AS1Q96PY0 264 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 MFFQ9GZY8 342 aa12.77□□□□□ -0.36
NIPAL3-204ENST00000374399 A0A1B0GU03 582 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 A0A1W2PPH5 198 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 L7N2F9 121 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 KRASP01116 189 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 EPHA1P21709 976 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 THBS3P49746 956 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 ARF6P62330 175 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 OPCMLQ14982 345 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 MIDNQ504T8 468 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 HCP5Q6MZN7 132 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 FAM168AQ92567 244 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 PERPQ96FX8 193 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 SPIN2AQ99865 258 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 SPIN2BQ9BPZ2 258 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 MMP26Q9NRE1 261 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 ONECUT1Q9UBC0 465 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 CACNG5Q9UF02 275 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 LSM5Q9Y4Y9 91 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 APCP25054 2843 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 MAP1AP78559 2803 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 ABCA12Q86UK0 2595 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 IGHV4-61A0A0C4DH41 118 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 AKR1C2P52895 323 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 ZNF345Q14585 488 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 ACOT7LQ6ZUV0 252 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 KCNRGQ8N5I3 272 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 CD300LFQ8TDQ1 290 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 DCUN1D4Q92564 292 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 TNFRSF14Q92956 283 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 S1PR3Q99500 378 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 GON7Q9BXV9 100 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 MRPL20Q9BYC9 149 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 GSX2Q9BZM3 304 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 PLEKHA2Q9HB19 425 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-204ENST00000374399 WNK2Q9Y3S1 2297 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 IGHV4-30-2A0A087WSY4 118 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 M0R1W7 72 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 RGS13O14921 159 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 HPRT1P00492 218 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 S100A11P31949 105 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 NKX2-1P43699 371 aaPredicted RBP12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 AP2S1P53680 142 aaPredicted RBP12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 LCN2P80188 198 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 SMCO1Q147U7 214 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 LDLRAD2Q5SZI1 272 aa12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 BARX1Q9HBU1 254 aaPredicted RBP12.75□□□□□ -0.37
NIPAL3-204ENST00000374399 PIGBOS1A0A0B4J2F0 54 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 MARCH11A6NNE9 402 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 FAM157AC9JC47 383 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 NDUFS8O00217 210 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 OR2F2O95006 317 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 NXPH3O95157 252 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 TMEM50AO95807 157 aa12.74□□□□□ -0.37
NIPAL3-204ENST00000374399 KIR2DS2P43631 304 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms