RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RCHY1Q96PM5 261 aa10.93□□□□□ -0.66
PRPF4-201ENST00000374198 QTRT1Q9BXR0 403 aaKnown RBP10.93□□□□□ -0.66
PRPF4-201ENST00000374198 TRBV9A0A0B4J1U6 114 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF816-ZNF321PA0A0X1KG74 233 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 NTSR1P30989 418 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 PRSS12P56730 875 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 PMCHL1Q16048 86 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 TMEM14EPQ6UXP3 125 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 SYT13Q7L8C5 426 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 THAP3Q8WTV1 239 aaPredicted RBP10.92□□□□□ -0.66
PRPF4-201ENST00000374198 APOBEC3DQ96AK3 386 aaPredicted RBP10.92□□□□□ -0.66
PRPF4-201ENST00000374198 SFXN3Q9BWM7 321 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 COPS7AQ9UBW8 275 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 WDFY4Q6ZS81 3184 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 IGKV1-6A0A0C4DH72 117 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 C17orf112F2Z3M2 114 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 CA2P00918 260 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 DEFA4P12838 97 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 NBL1P41271 181 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 CLDN18P56856 261 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 FBXW4P57775 412 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 C17orf67Q0P5P2 114 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 C19orf35Q6ZS72 473 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF441Q8N8Z8 693 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 TSTD1Q8NFU3 115 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 OCC1Q8TAD7 63 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 MRGPRX1Q96LB2 322 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 SPAG17Q6Q759 2223 aa10.92□□□□□ -0.66
PRPF4-201ENST00000374198 LOC102724200A0A096LPH7 203 aaPredicted RBP10.91□□□□□ -0.66
PRPF4-201ENST00000374198 K7ESF4 209 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 SLC17A3O00476 420 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 TAX1BP3O14907 124 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 IGKV1-5P01602 117 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 RDH5Q92781 318 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 SPTSSAQ969W0 71 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 SGCZQ96LD1 299 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 MMP17Q9ULZ9 603 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 RTTNQ86VV8 2226 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 KIR2DS5A0A0G2JLQ3 304 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 A0A0G2JNG1 304 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 B4DGG1 531 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 KIR2DS3K7RE56 304 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 KIR2DL1P43626 348 aaPredicted RBP10.91□□□□□ -0.66
PRPF4-201ENST00000374198 CDC34P49427 236 aaPredicted RBP10.91□□□□□ -0.66
PRPF4-201ENST00000374198 KIR2DS5Q14953 304 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 TRIP6Q15654 476 aaKnown RBP10.91□□□□□ -0.66
PRPF4-201ENST00000374198 BORCS7Q96B45 105 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 OXGR1Q96P68 337 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 TMEM147Q9BVK8 224 aa10.91□□□□□ -0.66
PRPF4-201ENST00000374198 ZNF430Q9H8G1 570 aaPredicted RBP10.91□□□□□ -0.66
PRPF4-201ENST00000374198 TRAV9-2A0A087WT02 112 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 TOX4O94842 621 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 CTXN2P0C2S0 81 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 SUMO3P55854 103 aaPredicted RBP10.9□□□□□ -0.66
PRPF4-201ENST00000374198 HHEXQ03014 270 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 LCN12Q6JVE5 192 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 BATF2Q8N1L9 274 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 OR2M7Q8NG81 312 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 PLEK2Q9NYT0 353 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 KIR2DS1A0A191URI9 304 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 A0A1W2PNR3 127 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 ODAMA1E959 279 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 CLDN1O95832 211 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 KIR2DS4P43632 304 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 TFF3Q07654 80 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 KIR2DS1Q14954 304 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 VASH2Q86V25 355 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 OR4P4Q8NGL7 312 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.9□□□□□ -0.66
PRPF4-201ENST00000374198 CLEC7AQ9BXN2 247 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 NPCDR1Q9BY65 106 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 MEGF9Q9H1U4 602 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 NAT8BQ9UHF3 227 aa10.9□□□□□ -0.66
PRPF4-201ENST00000374198 NCOA6Q14686 2063 aaPredicted RBP10.89□□□□□ -0.67
PRPF4-201ENST00000374198 TLX3O43711 291 aaPredicted RBP10.89□□□□□ -0.67
PRPF4-201ENST00000374198 CELA2BP08218 269 aaPredicted RBP10.89□□□□□ -0.67
PRPF4-201ENST00000374198 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 TMEM42Q69YG0 159 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 AMMECR1LQ6DCA0 310 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 FAM19A2Q8N3H0 131 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 ST6GALNAC3Q8NDV1 305 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 TNFRSF14Q92956 283 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 GAGE12BA1L429 117 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 OR2T8A6NH00 312 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 NPIPA2E9PIF3 369 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 NDUFS8O00217 210 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 IGLL1P15814 213 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 SRD5A2P31213 254 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 FUT6P51993 359 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 HTD2P86397 168 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 C16orf47Q6ZP98 133 aaPredicted RBP10.89□□□□□ -0.67
PRPF4-201ENST00000374198 OR1L1Q8NH94 360 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 ATP23Q9Y6H3 246 aa10.89□□□□□ -0.67
PRPF4-201ENST00000374198 GFRA3O60609 400 aa10.88□□□□□ -0.67
PRPF4-201ENST00000374198 MT-ND6P03923 174 aa10.88□□□□□ -0.67
PRPF4-201ENST00000374198 RHOBP62745 196 aa10.88□□□□□ -0.67
PRPF4-201ENST00000374198 PSG7Q13046 419 aa10.88□□□□□ -0.67
PRPF4-201ENST00000374198 LPAL2Q16609 132 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms