RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LINC00615Q96LM1 132 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-201ENST00000371817 C18orf15Q96N68 181 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
COL5A1-201ENST00000371817 TMEM252Q8N6L7 170 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 KLHDC9Q8NEP7 349 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 OR13H1Q8NG92 308 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 TM4SF19Q96DZ7 209 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 C16orf92Q96LL3 132 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 ANOS1P23352 680 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 H2BFSP57053 126 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 SLC25A40Q8TBP6 338 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 INSIG2Q9Y5U4 225 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 MED13LQ71F56 2210 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 SUMO2P61956 95 aaKnown RBP13.3□□□□□ -0.28
COL5A1-201ENST00000371817 TNFAIP6P98066 277 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-201ENST00000371817 FAM71F2Q6NXP2 309 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 K7EQS6 105 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 GHRHP01286 108 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 OR4X2Q8NGF9 303 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 OR6X1Q8NH79 312 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 NPFFR1Q9GZQ6 430 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 IGHV4-39P01824 125 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 SEC11AP67812 179 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 EFNB1P98172 346 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 TMEM222Q9H0R3 208 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 GTSF1LQ9H1H1 148 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 A8MWV9 139 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 COX7A1P24310 79 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 RNFT1Q5M7Z0 435 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 OR11H4Q8NGC9 324 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 WDYHV1Q96HA8 205 aa13.3□□□□□ -0.28
COL5A1-201ENST00000371817 CCL17Q92583 94 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 GREB1Q4ZG55 1949 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 NKX2-2O95096 273 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 LSM6P62312 80 aaKnown RBP13.29□□□□□ -0.28
COL5A1-201ENST00000371817 OR4A5Q8NH83 315 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 SSTR5P35346 364 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 NUTF2P61970 127 aaKnown RBP13.29□□□□□ -0.28
COL5A1-201ENST00000371817 BADQ92934 168 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 ZNF714Q96N38 554 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 PATJQ8NI35 1801 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 TRAV21A0A0B4J279 112 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 PSG6Q00889 435 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 RRN3P1Q2M238 152 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 CENPWQ5EE01 88 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 SAMD5Q5TGI4 173 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 ZNF562Q6V9R5 426 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 CA11O75493 328 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 RAB9AP51151 201 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 GPR82Q96P67 336 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 A0A1B0GW15 77 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 C1orf185Q5T7R7 199 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 TMEM91Q6ZNR0 172 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 FGF22Q9HCT0 170 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 TRBV5-4A0A0C4DH59 114 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 PPIHO43447 177 aaKnown RBP13.29□□□□□ -0.28
COL5A1-201ENST00000371817 TMEM108Q6UXF1 575 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 CHST5Q9GZS9 411 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 RABAC1Q9UI14 185 aa13.29□□□□□ -0.28
COL5A1-201ENST00000371817 TRAV8-1A0A0A6YYK1 113 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 SNRPCP09234 159 aaKnown RBP13.28□□□□□ -0.28
COL5A1-201ENST00000371817 CACNA1GO43497 2377 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 A0A1W2PP11 408 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 CAPZBP47756 277 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 PAX2Q02962 417 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 NR2C2APQ86WQ0 139 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 RAB1BQ9H0U4 201 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 NHP2Q9NX24 153 aaKnown RBP13.28□□□□□ -0.28
COL5A1-201ENST00000371817 TRBV20OR9-2A0A075B6H5 130 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 TPTE2P1Q5T6R2 138 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 C19orf24Q9BVV8 132 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 DNM1P46Q6ZS02 220 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 TUBA4BQ9H853 241 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 PNLIPP16233 465 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 PLSCR4Q9NRQ2 329 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 TRBV7-9A0A0J9YWB2 115 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 EFNB2P52799 333 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 METTL26Q96S19 204 aa13.28□□□□□ -0.28
COL5A1-201ENST00000371817 DLEC1Q9Y238 1755 aa13.27□□□□□ -0.28
COL5A1-201ENST00000371817 TRAV12-3A0A0B4J271 114 aa13.27□□□□□ -0.28
COL5A1-201ENST00000371817 ZNF83P51522 516 aa13.27□□□□□ -0.28
COL5A1-201ENST00000371817 MMDQ15546 238 aa13.27□□□□□ -0.28
COL5A1-201ENST00000371817 RAB1CQ92928 201 aa13.27□□□□□ -0.28
COL5A1-201ENST00000371817 HILPDAQ9Y5L2 63 aa13.27□□□□□ -0.28
COL5A1-201ENST00000371817 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 SERTM1A2A2V5 107 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 RPL36A-HNRNPH2H7BZ11 118 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 FAM19A2Q8N3H0 131 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 HCFC2Q9Y5Z7 792 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 COL10A1Q03692 680 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 IL36BQ9NZH7 164 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 PGPA6NDG6 321 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 DLEU1O43261 78 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 CRYBB3P26998 211 aa13.27□□□□□ -0.29
COL5A1-201ENST00000371817 ACSF3Q4G176 576 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-201ENST00000371817 SHISA8B8ZZ34 492 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms