RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 OR2A4O95047 310 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 IGHG1P01857 330 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 UBBP0CG47 229 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 TBPP20226 339 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 PSG4Q00888 419 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 P2RY6Q15077 328 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 NEDD8Q15843 81 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 Q5XG85 94 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 ZNF782Q6ZMW2 699 aaPredicted RBP3.16□□□□□ -1.9
MCF2-203ENST00000370576 WDR31Q8NA23 367 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 FAM19A4Q96LR4 140 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 OR2A7Q96R45 310 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 PFDN5Q99471 154 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 DEFB126Q9BYW3 111 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 KLRF1Q9NZS2 232 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 SHPKQ9UHJ6 478 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 BOKQ9UMX3 212 aaPredicted RBP3.16□□□□□ -1.9
MCF2-203ENST00000370576 NCOR1O75376 2440 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 ASXL3Q9C0F0 2248 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 IGHV3-20A0A0C4DH32 117 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 ZNF503-AS2A6NEH8 195 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 MFNGO00587 321 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 CXCL13O43927 109 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 ARL6IP5O75915 188 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 SNAPC5O75971 98 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 EIF4EP06730 217 aaKnown RBP3.16□□□□□ -1.9
MCF2-203ENST00000370576 ZNF25P17030 456 aaPredicted RBP3.16□□□□□ -1.9
MCF2-203ENST00000370576 ELK1P19419 428 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 ZNF66Q6ZN08 573 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 TMEM229BQ8NBD8 167 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 OR5H6Q8NGV6 325 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 PP6455Q8WZ26 134 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 IL22RA2Q969J5 263 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 TOMM40LQ969M1 308 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 OTULINQ96BN8 352 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 C20orf173Q96LM9 149 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 C20orf144Q9BQM9 153 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 TMEM133Q9H2Q1 129 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 MCUBQ9NWR8 336 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 VPS13AQ96RL7 3174 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 TTC28Q96AY4 2481 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 IGLV3-9A0A075B6K5 115 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 TRBV6-7A0A0A0MS04 114 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 PNMA8CA0A1B0GUJ8 204 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 DNASE2O00115 360 aaPredicted RBP3.16□□□□□ -1.9
MCF2-203ENST00000370576 MYL12AP19105 171 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 SDC2P34741 201 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 RHOBP62745 196 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 PAFAH1B2P68402 229 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 LAGE3Q14657 143 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 MORN2Q502X0 79 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 OR4A47Q6IF82 309 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 LRTM2Q8N967 370 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 UBAC2Q8NBM4 344 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 NUP37Q8NFH4 326 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 Q8TCH9 128 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 SFT2D1Q8WV19 159 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 TMEM203Q969S6 136 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 GALMQ96C23 342 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 ZHX1-C8orf76Q96EF9 292 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 MRPS24Q96EL2 167 aaKnown RBP3.16□□□□□ -1.9
MCF2-203ENST00000370576 PTGES2Q9H7Z7 377 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 C1orf123Q9NWV4 160 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 RPS6KB2Q9UBS0 482 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 SDK1Q7Z5N4 2213 aa3.16□□□□□ -1.9
MCF2-203ENST00000370576 A6NDN8 102 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 FAM183AA6NL82 134 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 TSTD3H0UI37 97 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 MYL12BO14950 172 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 CCL25O15444 150 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 REM1O75628 298 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 KBTBD11O94819 623 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 LHBP01229 141 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 TYMSP04818 313 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 CT45A6P0DMU7 189 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 CT45A5P0DMU8 189 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 CT45A7P0DMV0 189 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 IL7P13232 177 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 DVL1P1P54792 670 aaPredicted RBP3.15□□□□□ -1.9
MCF2-203ENST00000370576 RPS28P62857 69 aaKnown RBP3.15□□□□□ -1.9
MCF2-203ENST00000370576 TFF3Q07654 80 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 ACOT6Q3I5F7 207 aaPredicted RBP3.15□□□□□ -1.9
MCF2-203ENST00000370576 KRTAP21-3Q3LHN1 58 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 CT45A1Q5HYN5 189 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 TMEM244Q5VVB8 128 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 C16orf47Q6ZP98 133 aaPredicted RBP3.15□□□□□ -1.9
MCF2-203ENST00000370576 NEGR1Q7Z3B1 354 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 CENPSQ8N2Z9 138 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 BPIFB2Q8N4F0 458 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 METTL27Q8N6F8 245 aaPredicted RBP3.15□□□□□ -1.9
MCF2-203ENST00000370576 ZNF383Q8NA42 475 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 OR4K17Q8NGC6 315 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 OR5D14Q8NGL3 314 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 OR9Q1Q8NGQ5 310 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 CT45A3Q8NHU0 189 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 THAP6Q8TBB0 222 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 SEH1LQ96EE3 360 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 GPR82Q96P67 336 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 GNRHR2Q96P88 292 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 OR2H1Q9GZK4 316 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms