RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SLC36A2Q495M3 483 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 TMEM42Q69YG0 159 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 C1orf174Q8IYL3 243 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 PACRGLQ8N7B6 248 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 RNASE6Q93091 150 aaKnown RBP0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 PPWD1Q96BP3 646 aaKnown RBP0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 OR7D2Q96RA2 312 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 CYTH2Q99418 400 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 SIKE1Q9BRV8 207 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 MYOFQ9NZM1 2061 aa0.56□□□□□ -2.32
RNU4-48P-201ENST00000365559 NPATQ14207 1427 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 REREQ9P2R6 1566 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 IGKV3-7A0A075B6H7 116 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 TXNDC9O14530 226 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 HBZP02008 142 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 APOA1P02647 267 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 CCR2P41597 374 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 CTBP2P56545 445 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 TMEM267Q0VDI3 215 aaPredicted RBP0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 EXOC3L4Q17RC7 722 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 LGALS9BQ3B8N2 356 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 FBXO48Q5FWF7 155 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 LCN8Q6JVE9 175 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 FP248Q71RG6 208 aaPredicted RBP0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 SLC13A5Q86YT5 568 aaPredicted RBP0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 TMEM208Q9BTX3 173 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 TTTY13Q9BZ97 58 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 EIF5A2Q9GZV4 153 aaKnown RBP0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 ASCL3Q9NQ33 180 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 NRBP2Q9NSY0 501 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 TAAR3PQ9P1P4 343 aa0.55□□□□□ -2.32
RNU4-48P-201ENST00000365559 GRIN2BQ13224 1484 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 PTPRSQ13332 1948 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 GOLGA8QA0A0J9YX86 632 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 PLA2G10O15496 165 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 CIAO1O76071 339 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 NPYP01303 97 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 CRPP02741 224 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 PRB4P10163 310 aaPredicted RBP0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 SYT1P21579 422 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 IFNGR2P38484 337 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 AKR1C3P42330 323 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 RBM48Q5RL73 367 aaKnown RBP0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 COPS6Q7L5N1 327 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 KTN1-AS1Q86SY8 53 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 LRRC34Q8IZ02 419 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 SMIM12Q96EX1 92 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 SFRP2Q96HF1 295 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 AGPAT3Q9NRZ7 376 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 POLR3HQ9Y535 204 aaPredicted RBP0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 INTS1Q8N201 2190 aaKnown RBP0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 DIDO1Q9BTC0 2240 aaKnown RBP0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 CPAMD8Q8IZJ3 1885 aa0.54□□□□□ -2.32
RNU4-48P-201ENST00000365559 LOC100506127A0A0U1RQW1 187 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 M0R381 172 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 COPEO14579 308 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 MRPS14O60783 128 aaKnown RBP0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 PVALBP20472 110 aaPredicted RBP0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 CRATP43155 626 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 RPL27AP46776 148 aaKnown RBP0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 GABRA2P47869 451 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 AQP4P55087 323 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 HOXC5Q00444 222 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 GNA12Q03113 381 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 PLCXD2Q0VAA5 305 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 CDK5R1Q15078 307 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 Q3ZCU0 254 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 BAP18Q8IXM2 172 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 C15orf53Q8NAA6 179 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 OR1L8Q8NGR8 309 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 TLCD1Q96CP7 247 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 CPNE2Q96FN4 548 aaPredicted RBP0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 CST9LQ9H4G1 147 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 KLK5Q9Y337 293 aaPredicted RBP0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 GREB1Q4ZG55 1949 aa0.53□□□□□ -2.32
RNU4-48P-201ENST00000365559 THSD7AQ9UPZ6 1657 aa0.53□□□□□ -2.33
RNU4-48P-201ENST00000365559 DICER1Q9UPY3 1922 aaKnown RBP0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 ZNF469Q96JG9 3925 aaPredicted RBP0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 MICAL3Q7RTP6 2002 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 HEATR5AQ86XA9 2040 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 MEIKINA0A087WXM9 373 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 F8W036 122 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 KLRC4O43908 158 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 ADAP1O75689 374 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 ATP5G1P05496 136 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 S100A9P06702 114 aaKnown RBP0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 TPM1P09493 284 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 SYCP1Q15431 976 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 LYZL1Q6UWQ5 148 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 BLIDQ8IZY5 108 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 Q8WTZ3 238 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 NMNAT3Q96T66 252 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 DOHHQ9BU89 302 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 EMC3Q9P0I2 261 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 RBM7Q9Y580 266 aaKnown RBP0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 MAP3K19Q56UN5 1328 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 TMEM94Q12767 1356 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 SIPA1L1O43166 1804 aa0.52□□□□□ -2.33
RNU4-48P-201ENST00000365559 CCDC88AQ3V6T2 1871 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms