RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 NHLH1Q02575 133 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 ATP1A1-AS1Q5TC04 95 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 TMEM256Q8N2U0 113 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 ZIC4Q8N9L1 334 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 OR2M7Q8NG81 312 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 OR51H1Q8NH63 302 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 NEK7Q8TDX7 302 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 GVINP1Q7Z2Y8 2422 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 MED13Q9UHV7 2174 aa16.08■□□□□ 0.16
CMTM3-201ENST00000361909 ZNF32P17041 273 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 BCL3P20749 454 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 CLEC12BQ2HXU8 276 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 LINC00696Q6ZRV3 163 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 OR4B1Q8NGF8 309 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 OR10V1Q8NGI7 309 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 OR5P3Q8WZ94 311 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 A6NNC1 897 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 NKX2-8O15522 239 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 IGKV1-39P01597 117 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 IGKV1D-39P04432 117 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 RFPL3SP0C7P2 107 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 GCH1P30793 250 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 SPANXN5Q5MJ07 72 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 NUFIP2Q7Z417 695 aaKnown RBP16.07■□□□□ 0.16
CMTM3-201ENST00000361909 PRDM14Q9GZV8 571 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 ELOVL5Q9NYP7 299 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 B4GALT7Q9UBV7 327 aa16.07■□□□□ 0.16
CMTM3-201ENST00000361909 C11orf94C9JXX5 98 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 MMP23AO75900 390 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 KRASP01116 189 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 IGKV1-5P01602 117 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 MDS2Q8NDY4 140 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 DIRC2Q96SL1 478 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 OR2H1Q9GZK4 316 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 KCNIP2Q9NS61 270 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 KLF13Q9Y2Y9 288 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-201ENST00000361909 PINLYPA6NC86 204 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 SYNGR4O95473 234 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 CHRNA7P36544 502 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 PRSS8Q16651 343 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 MKXQ8IYA7 352 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 AURKAIP1Q9NWT8 199 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-201ENST00000361909 PLA2G3Q9NZ20 509 aa16.06■□□□□ 0.16
CMTM3-201ENST00000361909 RNF212BA8MTL3 300 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 PAGE4O60829 102 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 SP1P08047 785 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 WNT5AP41221 380 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 C21orf62-AS1Q17RA5 79 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 CST9LP1Q5W188 147 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 Q6ZWC4 215 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 MOB1BQ7L9L4 216 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 C1QTNF5Q9BXJ0 243 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 CUL9Q8IWT3 2517 aa16.05■□□□□ 0.16
CMTM3-201ENST00000361909 ZNF891A8MT65 544 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-201ENST00000361909 C17orf112F2Z3M2 114 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 GDF1P27539 372 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 PSG4Q00888 419 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 FBXW9Q5XUX1 488 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 YRDCQ86U90 279 aaKnown RBP16.04■□□□□ 0.16
CMTM3-201ENST00000361909 WFIKKN1Q96NZ8 548 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 UCN2Q96RP3 112 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 WNT5BQ9H1J7 359 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 ZNF552Q9H707 407 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-201ENST00000361909 NCKAP5O14513 1909 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 MDFIC2A0A1B0GVS7 189 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 TRAPPC2LH3BP13 241 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 KLRC4-KLRK1H3BQV0 150 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-201ENST00000361909 TRAPPC6AO75865 159 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 CD46P15529 392 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 ADMP35318 185 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 OR5I1Q13606 314 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 FFAR4Q5NUL3 377 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 ZNF709Q8N972 641 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 RAB1CQ92928 201 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 ZNF837Q96EG3 531 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-201ENST00000361909 ZNF703Q9H7S9 590 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-201ENST00000361909 HSPB7Q9UBY9 170 aa16.04■□□□□ 0.16
CMTM3-201ENST00000361909 IGHV3-15A0A0B4J1V0 119 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 A0A0J9YW62 118 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 GFRA1P56159 465 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 RAC3P60763 192 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 SRSF6Q13247 344 aaKnown RBP16.03■□□□□ 0.16
CMTM3-201ENST00000361909 VWC2Q2TAL6 325 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 RIPPLY2Q5TAB7 128 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 OR5AU1Q8NGC0 362 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 SFRP2Q96HF1 295 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 ERRFI1Q9UJM3 462 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-201ENST00000361909 WT1P19544 449 aaPredicted RBP16.03■□□□□ 0.16
CMTM3-201ENST00000361909 MSMO1Q15800 293 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 DMRTA1Q5VZB9 504 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 MSL2Q9HCI7 577 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 WIPI2Q9Y4P8 454 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 FREM2Q5SZK8 3169 aa16.03■□□□□ 0.16
CMTM3-201ENST00000361909 CNTRLQ7Z7A1 2325 aa16.02■□□□□ 0.16
CMTM3-201ENST00000361909 SIAH2O43255 324 aa16.02■□□□□ 0.16
CMTM3-201ENST00000361909 CLDN1O95832 211 aa16.02■□□□□ 0.16
CMTM3-201ENST00000361909 EDN3P14138 238 aa16.02■□□□□ 0.16
CMTM3-201ENST00000361909 RAB7AP51149 207 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms