RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 OR52I1Q8NGK6 324 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 FAM46BQ96A09 425 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 FAAP24Q9BTP7 215 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 TECRQ9NZ01 308 aaKnown RBP12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 ABRACLQ9P1F3 81 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 MLXQ9UH92 298 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 TRBV5-5A0A0J9YX44 114 aa12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 A0A1W2PPK0 400 aa12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 ATF4P18848 351 aaPredicted RBP12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 ZIK1Q3SY52 487 aaPredicted RBP12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 RPL22L1Q6P5R6 122 aaKnown RBP12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 ZNF880Q6PDB4 577 aa12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 PDPNQ86YL7 162 aa12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 SLC7A6OSQ96CW6 309 aaPredicted RBP12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 TP53TG1Q9Y2A0 90 aa12.15□□□□□ -0.46
NECTIN1-202ENST00000340882 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 ITGB1BP1O14713 200 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 GYG2O15488 501 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 OR2C1O95371 312 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 LALBAP00709 142 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 MED14OSP0DP75 135 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 CBLN1P23435 193 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 RPS11P62280 158 aaKnown RBP eCLIP12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 TM4SF20Q53R12 229 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 OR2G6Q5TZ20 316 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 Q6ZWC4 215 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 C6orf201Q7Z4U5 140 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 AP4S1Q9Y587 144 aa12.14□□□□□ -0.47
NECTIN1-202ENST00000340882 TRBV9A0A0B4J1U6 114 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 NAPSAO96009 420 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 OR9G9P0C7N8 305 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 CEACAM6P40199 344 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 SETD6Q8TBK2 473 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 MYCBPQ99417 103 aaPredicted RBP12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 PHB2Q99623 299 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
NECTIN1-202ENST00000340882 TMEM213A2RRL7 107 aa12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 OGG1O15527 345 aa12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 ETV1P50549 477 aa12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 DNAL1Q4LDG9 190 aa12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 CCDC58Q4VC31 144 aa12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 ZNF57Q68EA5 555 aaPredicted RBP12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 OR10K2Q6IF99 312 aa12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 RNF183Q96D59 192 aa12.12□□□□□ -0.47
NECTIN1-202ENST00000340882 TRBV5-7A0A0A0MS05 114 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 SNTNA6NMZ2 147 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 M0R1X1 148 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 LGALS9O00182 355 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 APOA2P02652 100 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 ALPLP05186 524 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 NANOS2P60321 138 aaKnown RBP12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 SMIM19Q96E16 107 aa12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
NECTIN1-202ENST00000340882 HSPG2P98160 4391 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 OR2J3O76001 311 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 CTRB1P17538 263 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 HTR2CP28335 458 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 CAPGP40121 348 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 Q499Y3 187 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 CTRB2Q6GPI1 263 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 ZFP41Q8N8Y5 198 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 UXS1Q8NBZ7 420 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 CCDC197Q8NCU1 140 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 SRSF12Q8WXF0 261 aaKnown RBP12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 THRSPQ92748 146 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 PTX4Q96A99 478 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 C5orf30Q96GV9 206 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 CENPNQ96H22 339 aaPredicted RBP12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 HARBI1Q96MB7 349 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 NEDD4LQ96PU5 975 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 NICN1Q9BSH3 213 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 CHMP1AQ9HD42 196 aaPredicted RBP12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 MRPS18AQ9NVS2 196 aaKnown RBP12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
NECTIN1-202ENST00000340882 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 GGCTO75223 188 aaKnown RBP12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 TUSC2O75896 110 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 SCTP09683 121 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 APOC4P55056 127 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 TNXAQ16473 311 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 C15orf32Q32M92 178 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 IDO2Q6ZQW0 420 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 RHOXF1Q8NHV9 184 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 EDARADDQ8WWZ3 215 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 KCNK15Q9H427 330 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 CKLFQ9UBR5 152 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 ZNF221Q9UK13 617 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 S4R3C0 116 aa12.09□□□□□ -0.47
NECTIN1-202ENST00000340882 DYNC1I1O14576 645 aa12.08□□□□□ -0.48
NECTIN1-202ENST00000340882 EI24O14681 340 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms