RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 OR1B1Q8NGR6 318 aa12.48□□□□□ -0.41
RET-201ENST00000340058 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
RET-201ENST00000340058 CRYBA1P05813 215 aa12.47□□□□□ -0.41
RET-201ENST00000340058 UBE2L3P68036 154 aaKnown RBP12.47□□□□□ -0.41
RET-201ENST00000340058 HGFACQ04756 655 aa12.47□□□□□ -0.41
RET-201ENST00000340058 OR13A1Q8NGR1 328 aa12.47□□□□□ -0.41
RET-201ENST00000340058 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
RET-201ENST00000340058 PRSS44E7EML9 344 aa12.47□□□□□ -0.41
RET-201ENST00000340058 TSTD3H0UI37 97 aa12.47□□□□□ -0.41
RET-201ENST00000340058 PHOX2AO14813 284 aa12.47□□□□□ -0.41
RET-201ENST00000340058 FAM216AQ8WUB2 273 aa12.47□□□□□ -0.41
RET-201ENST00000340058 RBKSQ9H477 322 aa12.47□□□□□ -0.41
RET-201ENST00000340058 CLCF1Q9UBD9 225 aa12.47□□□□□ -0.41
RET-201ENST00000340058 SELLP14151 372 aa12.47□□□□□ -0.41
RET-201ENST00000340058 PRRX1P54821 245 aa12.47□□□□□ -0.41
RET-201ENST00000340058 ARF6P62330 175 aa12.47□□□□□ -0.41
RET-201ENST00000340058 BSXQ3C1V8 233 aa12.47□□□□□ -0.41
RET-201ENST00000340058 FAM210BQ96KR6 192 aa12.47□□□□□ -0.41
RET-201ENST00000340058 TM2D1Q9BX74 207 aa12.47□□□□□ -0.41
RET-201ENST00000340058 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
RET-201ENST00000340058 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
RET-201ENST00000340058 CEACAM1P13688 526 aa12.47□□□□□ -0.41
RET-201ENST00000340058 SULT1A2P50226 295 aa12.47□□□□□ -0.41
RET-201ENST00000340058 RHOBP62745 196 aa12.47□□□□□ -0.41
RET-201ENST00000340058 SLC16A13Q7RTY0 426 aa12.47□□□□□ -0.41
RET-201ENST00000340058 OR10D4PQ8NGN7 298 aa12.47□□□□□ -0.41
RET-201ENST00000340058 NEIL1Q96FI4 390 aaPredicted RBP12.47□□□□□ -0.41
RET-201ENST00000340058 LAMA2P24043 3122 aaKnown RBP12.46□□□□□ -0.41
RET-201ENST00000340058 IGHV2OR16-5A0A0B4J2B6 119 aa12.46□□□□□ -0.41
RET-201ENST00000340058 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
RET-201ENST00000340058 RAB29O14966 203 aa12.46□□□□□ -0.41
RET-201ENST00000340058 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
RET-201ENST00000340058 CRYGSP22914 178 aa12.46□□□□□ -0.41
RET-201ENST00000340058 OR1L4Q8NGR5 311 aa12.46□□□□□ -0.41
RET-201ENST00000340058 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
RET-201ENST00000340058 TMUB1Q9BVT8 246 aa12.46□□□□□ -0.41
RET-201ENST00000340058 SERTM2A0A1B0GWG4 89 aa12.46□□□□□ -0.41
RET-201ENST00000340058 K7N7A8 449 aa12.46□□□□□ -0.41
RET-201ENST00000340058 REG1AP05451 166 aa12.46□□□□□ -0.41
RET-201ENST00000340058 HOXA4Q00056 320 aaPredicted RBP12.46□□□□□ -0.41
RET-201ENST00000340058 LRP11Q86VZ4 500 aa12.46□□□□□ -0.41
RET-201ENST00000340058 AQP10Q96PS8 301 aa12.46□□□□□ -0.41
RET-201ENST00000340058 SLC25A17O43808 307 aa12.46□□□□□ -0.42
RET-201ENST00000340058 CLN5O75503 358 aa12.46□□□□□ -0.42
RET-201ENST00000340058 CAMPP49913 170 aa12.46□□□□□ -0.42
RET-201ENST00000340058 SH2D2AQ9NP31 389 aa12.46□□□□□ -0.42
RET-201ENST00000340058 PARP11Q9NR21 331 aa12.46□□□□□ -0.42
RET-201ENST00000340058 IGHV3-35A0A0C4DH35 117 aa12.45□□□□□ -0.42
RET-201ENST00000340058 IGSF23A1L1A6 192 aa12.45□□□□□ -0.42
RET-201ENST00000340058 LYNX1G3V0Z9 82 aa12.45□□□□□ -0.42
RET-201ENST00000340058 LYNX1P0DP58 116 aa12.45□□□□□ -0.42
RET-201ENST00000340058 GFRA1P56159 465 aa12.45□□□□□ -0.42
RET-201ENST00000340058 SLC35B1P78383 322 aa12.45□□□□□ -0.42
RET-201ENST00000340058 MIC13Q5XKP0 118 aa12.45□□□□□ -0.42
RET-201ENST00000340058 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
RET-201ENST00000340058 SNX22Q96L94 193 aa12.45□□□□□ -0.42
RET-201ENST00000340058 PNRC2Q9NPJ4 139 aaKnown RBP12.45□□□□□ -0.42
RET-201ENST00000340058 GALR1P47211 349 aa12.45□□□□□ -0.42
RET-201ENST00000340058 LINC00596Q86U02 117 aa12.45□□□□□ -0.42
RET-201ENST00000340058 MRPL30Q8TCC3 161 aaKnown RBP12.45□□□□□ -0.42
RET-201ENST00000340058 ABCA2Q9BZC7 2435 aa12.45□□□□□ -0.42
RET-201ENST00000340058 CHD8Q9HCK8 2581 aa12.45□□□□□ -0.42
RET-201ENST00000340058 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
RET-201ENST00000340058 CD1BP29016 333 aa12.45□□□□□ -0.42
RET-201ENST00000340058 CNN1P51911 297 aaKnown RBP12.45□□□□□ -0.42
RET-201ENST00000340058 DEFA6Q01524 100 aa12.45□□□□□ -0.42
RET-201ENST00000340058 ATRAIDQ6UW56 229 aa12.45□□□□□ -0.42
RET-201ENST00000340058 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
RET-201ENST00000340058 OR2T6Q8NHC8 308 aa12.45□□□□□ -0.42
RET-201ENST00000340058 ZNF714Q96N38 554 aa12.45□□□□□ -0.42
RET-201ENST00000340058 TIMM9Q9Y5J7 89 aa12.45□□□□□ -0.42
RET-201ENST00000340058 OR51B2Q9Y5P1 312 aa12.45□□□□□ -0.42
RET-201ENST00000340058 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
RET-201ENST00000340058 H3BTX0 84 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM157CP0CG43 387 aa12.44□□□□□ -0.42
RET-201ENST00000340058 CSN1S1P47710 185 aa12.44□□□□□ -0.42
RET-201ENST00000340058 ZNF705AQ6ZN79 300 aaPredicted RBP12.44□□□□□ -0.42
RET-201ENST00000340058 OR8B3Q8NGG8 313 aa12.44□□□□□ -0.42
RET-201ENST00000340058 OR8B2Q96RD0 313 aa12.44□□□□□ -0.42
RET-201ENST00000340058 SLC35E3Q7Z769 313 aa12.44□□□□□ -0.42
RET-201ENST00000340058 CACFD1Q9UGQ2 172 aa12.44□□□□□ -0.42
RET-201ENST00000340058 KCNMB2Q9Y691 235 aa12.44□□□□□ -0.42
RET-201ENST00000340058 PQLC2LA1A4F0 135 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A10PA6NDY2 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A18PA6NE21 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A16PA6NEW6 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A20PA6NIJ5 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A8PA6NJQ4 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A7PA6NKC0 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A22PA8MWA6 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A12PA8MX19 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A5PA8MXJ8 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A23PA8MXZ1 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 K7EQM0 130 aa12.44□□□□□ -0.42
RET-201ENST00000340058 CD8AP01732 235 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A15PP0C7V4 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A13PP0C7W8 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A14PP0C7W9 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 FAM90A24PP0C7X0 464 aa12.44□□□□□ -0.42
RET-201ENST00000340058 OR4X1Q8NH49 305 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms