RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 SSNA1O43805 119 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 IGHV1-69P01742 117 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 SERPINE2P07093 398 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 ZNF16P17020 682 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 UCP1P25874 307 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 BPIFB3P59826 476 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 PRB3Q04118 309 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 ZNF816Q0VGE8 651 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 SLC9A3R2Q15599 337 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 CIARTQ8N365 385 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 C12orf45Q8N5I9 185 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 GLYATL2Q8WU03 294 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 NAV3Q8IVL0 2385 aa11.79□□□□□ -0.52
NIPAL3-202ENST00000339255 A0A1B0GVG6 124 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 LINC00473A8K010 186 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 NPFFO15130 113 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 APOA2P02652 100 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 RAB13P51153 203 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 ARHGDIBP52566 201 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 TMEM187Q14656 261 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 TPTE2P1Q5T6R2 138 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 DHRS7BQ6IAN0 325 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 LGI3Q8N145 548 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 OR8H3Q8N146 312 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 LRTM2Q8N967 370 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 DDB2Q92466 427 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 GPHA2Q96T91 129 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 MRPL20Q9BYC9 149 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 MED28Q9H204 178 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 hCG_2014768A0A024R1R8 64 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 TRAV40A0A0B4J280 105 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 SMAD7O15105 426 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 CDS2O95674 445 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 CT45A6P0DMU7 189 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 CT45A5P0DMU8 189 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 CT45A7P0DMV0 189 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 RRASP10301 218 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 MC5RP33032 325 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 SAA4P35542 130 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 RRAS2P62070 204 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 RPL30P62888 115 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 SP6Q3SY56 376 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 SPAG16Q8N0X2 631 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 DRAXINQ8NBI3 349 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 OR5AN1Q8NGI8 311 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 OR4S2Q8NH73 311 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 MALSU1Q96EH3 234 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
NIPAL3-202ENST00000339255 DUXBA0A1W2PPF3 345 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 VGLL3A8MV65 326 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 ATG12O94817 140 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 TRAPPC2P0DI81 140 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 TRAPPC2BP0DI82 140 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 BCAP31P51572 246 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 ANKRD55Q3KP44 614 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 C1orf229Q6ZS94 237 aaPredicted RBP11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 PDZD9Q8IXQ8 264 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 CADM3Q8N126 398 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 ZNF383Q8NA42 475 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 RBPMSQ93062 196 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 SETXQ7Z333 2677 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 OTOGQ6ZRI0 2925 aa11.77□□□□□ -0.53
NIPAL3-202ENST00000339255 IGHV1-3A0A0C4DH29 117 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 CD5LO43866 347 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 REG1BP48304 166 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 ZNF695Q8IW36 515 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 C18orf12Q96KH6 178 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 NABP2Q9BQ15 211 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 WASHC3Q9Y3C0 194 aa11.76□□□□□ -0.53
NIPAL3-202ENST00000339255 A0A1W2PPI3 338 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 H0YJW9 148 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 FCGR3BO75015 233 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 HABP2Q14520 560 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 LIN54Q6MZP7 749 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 PDPNQ86YL7 162 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 UXS1Q8NBZ7 420 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 NANPQ8TBE9 248 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 CHAC2Q8WUX2 184 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 AIFM2Q9BRQ8 373 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 SLC35D1Q9NTN3 355 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 H7C2Y5 167 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 RAMP3O60896 148 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 HPRT1P00492 218 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 IFNA21P01568 189 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 HLA-GP17693 338 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 SSX2Q16385 188 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 OR2B11Q5JQS5 317 aa11.75□□□□□ -0.53
NIPAL3-202ENST00000339255 LDLRAD2Q5SZI1 272 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms