RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 LHX2P50458 406 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 LTC4SQ16873 150 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 NUDT10Q8NFP7 164 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 OR13D1Q8NGV5 346 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 CLDN34H7C241 214 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 IL6RP08887 468 aaPredicted RBP13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 KRTAP27-1Q3LI81 207 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 COL5A1-AS1Q5SY13 56 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM251Q8N6I4 163 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 PLPPR1Q8TBJ4 325 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 ABHD14BQ96IU4 210 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 POM121L2Q96KW2 1035 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 CLUHP3Q96NS8 147 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 MS4A10Q96PG2 267 aa13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 CIB3Q96Q77 187 aaPredicted RBP13.99□□□□□ -0.17
CDC42EP4-201ENST00000335793 MAP1LC3B2A6NCE7 125 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 CEBPDP49716 269 aaPredicted RBP13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 SPINK9Q5DT21 86 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 ODF3L1Q8IXM7 274 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 SAXO1Q8IYX7 474 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 ST6GALNAC3Q8NDV1 305 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 MAP1LC3BQ9GZQ8 125 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZNF703Q9H7S9 590 aaPredicted RBP13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 RNF115Q9Y4L5 304 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 MED12LQ86YW9 2145 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM265A0A087WTH1 108 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 NEURL1O76050 574 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 IFNA1P01562 189 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 PMP22Q01453 160 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZNF324BQ6AW86 544 aaPredicted RBP13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 OR4C5Q8NGB2 326 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM45BQ96B21 275 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 PLPPR2Q96GM1 343 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 OR4C12Q96R67 309 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 SMIM7Q9BQ49 75 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 OBP2BQ9NPH6 170 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 KCNIP1Q9NZI2 227 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 MPC1Q9Y5U8 109 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 A0A1B0GW64 132 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 OR5B21A6NL26 309 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 MT-CO3P00414 261 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 BCL2P10415 239 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 CLDN18P56856 261 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 ARL16Q0P5N6 197 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM108Q6UXF1 575 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 SMIM15Q7Z3B0 74 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 H1FOOQ8IZA3 346 aaPredicted RBP13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 C11orf1Q9H5F2 150 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 CDH20Q9HBT6 801 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 NCKAP5O14513 1909 aa13.98□□□□□ -0.17
CDC42EP4-201ENST00000335793 UBE2NP61088 152 aaKnown RBP13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 MDP1Q86V88 176 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 GBGT1Q8N5D6 347 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 SVIPQ8NHG7 77 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 RNASEH2CQ8TDP1 164 aaKnown RBP13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 VN1R17PQ8TDU5 208 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 NINJ1Q92982 152 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 SLC25A22Q9H936 323 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 LIN7CQ9NUP9 197 aaKnown RBP13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 LOC102723971A0A1B0GUV8 181 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 OR2H2O95918 312 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 MDH2P40926 338 aaKnown RBP13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 RTL8AQ9BWD3 113 aa13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 CNOT1A5YKK6 2376 aaKnown RBP13.97□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZNF737O75373 536 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 RAC2P15153 192 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 PLA2G5P39877 138 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 SLC38A11Q08AI6 406 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 ATP6V1FQ16864 119 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 GCNT2Q8N0V5 402 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM256Q8N2U0 113 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 STPG4Q8N801 248 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 PCGF1Q9BSM1 259 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 ZFHX2Q9C0A1 2572 aaPredicted RBP13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMEM238C9JI98 176 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 GOSR1O95249 250 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 SOX8P57073 446 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 UNQ5815/PRO19632Q6UWF5 114 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 TMPRSS7Q7RTY8 843 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 FGFRL1Q8N441 504 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 OR8G5Q8NG78 346 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 NANOS1Q8WY41 292 aaKnown RBP13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 NUDT11Q96G61 164 aa13.96□□□□□ -0.17
CDC42EP4-201ENST00000335793 J3QW42 95 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR5G3P0C626 314 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 BMP5P22003 454 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 GABRA2P47869 451 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 Q6ZS49 121 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 ZNF709Q8N972 641 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 RFESDQ8TAC1 157 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 LINC00470Q9BZP3 86 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 RBKSQ9H477 322 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 TMEM9BQ9NQ34 198 aa13.96□□□□□ -0.18
CDC42EP4-201ENST00000335793 PIGBOS1A0A0B4J2F0 54 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 PPP5D1E7EU14 171 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 G6PCP35575 357 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 RIPPLY3P57055 190 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 MRPL49Q13405 166 aaKnown RBP13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 SLC35E1Q96K37 410 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 J3QT63 122 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms