RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PARD6AQ9NPB6 346 aa10.33□□□□□ -0.76
VPS33B-201ENST00000333371 LAMP3Q9UQV4 416 aa10.33□□□□□ -0.76
VPS33B-201ENST00000333371 SH2D1BO14796 132 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 RBMXL2O75526 392 aaKnown RBP10.32□□□□□ -0.76
VPS33B-201ENST00000333371 PTBP3O95758 552 aaKnown RBP10.32□□□□□ -0.76
VPS33B-201ENST00000333371 FGF7P21781 194 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 RPL23P62829 140 aaKnown RBP10.32□□□□□ -0.76
VPS33B-201ENST00000333371 COL10A1Q03692 680 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 TBC1D28Q2M2D7 210 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 TMEM178AQ8NBL3 297 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 OR13D1Q8NGV5 346 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 OR4F5Q8NH21 305 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 PACRGQ96M98 296 aaPredicted RBP10.32□□□□□ -0.76
VPS33B-201ENST00000333371 OR4F4Q96R69 305 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 DCTN5Q9BTE1 182 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 AGFG2O95081 481 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 HIST1H1BP16401 226 aaKnown RBP10.32□□□□□ -0.76
VPS33B-201ENST00000333371 SSTR5P35346 364 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 GCSAMLQ5JQS6 135 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 MOB1BQ7L9L4 216 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 P2RX4Q99571 388 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 PARLQ9H300 379 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 WIPI2Q9Y4P8 454 aa10.32□□□□□ -0.76
VPS33B-201ENST00000333371 CNOT1A5YKK6 2376 aaKnown RBP10.32□□□□□ -0.76
VPS33B-201ENST00000333371 MAP1BP46821 2468 aaKnown RBP10.32□□□□□ -0.76
VPS33B-201ENST00000333371 TRBV24-1A0A075B6N3 115 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 TRGV5A0A0B4J1U4 118 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 HBZP02008 142 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 IL2RGP31785 369 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 ZNF146Q15072 292 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 P2RY6Q15077 328 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 PRAMEF6Q5VXH4 476 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 ZNF645Q8N7E2 425 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OR10G9Q8NGN4 311 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OR10G7Q8NGN6 311 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OBP2BQ9NPH6 170 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 TMEM242Q9NWH2 141 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 HSPB7Q9UBY9 170 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 NAT8Q9UHE5 227 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 LRRC30A6NM36 301 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 LINC00473A8K010 186 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 C1QTNF9BB2RNN3 333 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 MLNRO43193 412 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 IGHV3-13P01766 116 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 IGHV3-7P01780 117 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OPN1MWP04001 364 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 PFN1P07737 140 aaKnown RBP10.31□□□□□ -0.76
VPS33B-201ENST00000333371 WNT2P09544 360 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OPN1MW2P0DN77 364 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OPN1MW3P0DN78 364 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 GABRA2P47869 451 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 BSXQ3C1V8 233 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OR10A7Q8NGE5 316 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 PINX1Q96BK5 328 aaKnown RBP10.31□□□□□ -0.76
VPS33B-201ENST00000333371 COQ2Q96H96 371 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 PCGF1Q9BSM1 259 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 CDH20Q9HBT6 801 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 POLDIP2Q9Y2S7 368 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 A0A1W2PPQ1 181 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 NKX2-8O15522 239 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 PAGE4O60829 102 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 IFNA1P01562 189 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 CRYAAP02489 173 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 IGHV1-2P23083 117 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 CCL11P51671 97 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 DEFA6Q01524 100 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 OR51G1Q8NGK1 321 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 RAB24Q969Q5 203 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 GALMQ96C23 342 aa10.31□□□□□ -0.76
VPS33B-201ENST00000333371 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
VPS33B-201ENST00000333371 IFNL4K9M1U5 179 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 ST8SIA5O15466 376 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 KBTBD11O94819 623 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 ZNF600Q6ZNG1 722 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 CYP2G1PQ6ZSU1 146 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 DTD1Q8TEA8 209 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 NANOS1Q8WY41 292 aaKnown RBP10.3□□□□□ -0.76
VPS33B-201ENST00000333371 C14orf144Q96I85 54 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 GFOD1Q9NXC2 390 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 KCNIP1Q9NZI2 227 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 ZNF318Q5VUA4 2279 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 P0C879 139 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 NPPCP23582 126 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 UBE2G2P60604 165 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 WFIKKN1Q96NZ8 548 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 NPCDR1Q9BY65 106 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 FAM234AQ9H0X4 552 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 MSL2Q9HCI7 577 aa10.3□□□□□ -0.76
VPS33B-201ENST00000333371 RAC2P15153 192 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 GALR1P47211 349 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 PSMB3P49720 205 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 Q3ZCU0 254 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 SSX9Q7RTT3 188 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 C11orf53Q8IXP5 236 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 OR13A1Q8NGR1 328 aa10.29□□□□□ -0.76
VPS33B-201ENST00000333371 KLF14Q8TD94 323 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-201ENST00000333371 TNCP24821 2201 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms