RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 C8orf46Q8TAG6 207 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 ST8SIA2Q92186 375 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 LSM10Q969L4 123 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 AGMATQ9BSE5 352 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 LINC00574Q9H8X3 128 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 PLEKHA2Q9HB19 425 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 GNG12Q9UBI6 72 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 NSG2Q9Y328 171 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 POMT1Q9Y6A1 747 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 LOC105371242A0A075B767 164 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 IGHV3-43A0A0B4J1X8 118 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 ZNF729A6NN14 1252 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 FAM157AC9JC47 383 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 IGHV3-43DP0DP04 118 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 USF1P22415 310 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 RAB14P61106 215 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 LCN2P80188 198 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 FAM53AQ6NSI3 398 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 ZNF66Q6ZN08 573 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 FOXRED2Q8IWF2 684 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 Q96MF0 132 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 RNF150Q9ULK6 438 aa15.38■□□□□ 0.05
EXOSC3-201ENST00000327304 NOTCH2Q04721 2471 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 PRRC2AP48634 2157 aaKnown RBP15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 RPS10-NUDT3A0A1W2PQS6 291 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 MSGN1A6NI15 193 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 A8MXK9 166 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 KCNAB3O43448 404 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 OMGP23515 440 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 DLX6P56179 175 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 ZNF585BQ52M93 769 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 LY6G5BQ8NDX9 201 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 PHYHIPLQ96FC7 376 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 ZNF714Q96N38 554 aa15.37■□□□□ 0.05
EXOSC3-201ENST00000327304 PPIAL4CA0A0B4J2A2 164 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 A0A1B0GU03 582 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 TAAR5O14804 337 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 SPDEFO95238 335 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 PPIAL4GP0DN37 164 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 HKR1P10072 659 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 S100A1P23297 94 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 NKX2-1P43699 371 aaPredicted RBP15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 ERVFRD-1P60508 538 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 LTC4SQ16873 150 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 STOML3Q8TAV4 291 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 C5orf30Q96GV9 206 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 ZNF471Q9BX82 626 aaPredicted RBP15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 TAS2R3Q9NYW6 316 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 PSG11Q9UQ72 335 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 RNF223E7ERA6 249 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 MMP23AO75900 390 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 IGKV1-39P01597 117 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 IGKV1D-39P04432 117 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 ZNF16P17020 682 aaPredicted RBP15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 RPL12P30050 165 aaKnown RBP15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 PRAMEF5Q5TYX0 476 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 FAM219AQ8IW50 185 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 HSD17B10Q99714 261 aaKnown RBP15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 FOXC2Q99958 501 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 LPAR2Q9HBW0 351 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 SDHAF2Q9NX18 166 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 GFOD1Q9NXC2 390 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 GAB2Q9UQC2 676 aa15.36■□□□□ 0.05
EXOSC3-201ENST00000327304 LINC00862A6NCI5 91 aa15.35■□□□□ 0.05
EXOSC3-201ENST00000327304 P2RY1P47900 373 aa15.35■□□□□ 0.05
EXOSC3-201ENST00000327304 ALKAL2Q6UX46 152 aa15.35■□□□□ 0.05
EXOSC3-201ENST00000327304 WFDC11Q8NEX6 87 aa15.35■□□□□ 0.05
EXOSC3-201ENST00000327304 REG4Q9BYZ8 158 aa15.35■□□□□ 0.05
EXOSC3-201ENST00000327304 GAL3ST2Q9H3Q3 398 aa15.35■□□□□ 0.05
EXOSC3-201ENST00000327304 YLPM1P49750 1951 aaKnown RBP15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 ST8SIA5O15466 376 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 RAB7AP51149 207 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 ID3Q02535 119 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 PAX2Q02962 417 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 UTF1Q5T230 341 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 GPR157Q5UAW9 335 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 MAPK1IP1LQ8NDC0 245 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 OR10A7Q8NGE5 316 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 GPR146Q96CH1 333 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 IDI2-AS1Q9NZ38 188 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 ITPR3Q14573 2671 aa15.34■□□□□ 0.05
EXOSC3-201ENST00000327304 PITX3O75364 302 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 FOXH1O75593 365 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 LIPFP07098 398 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 MMP9P14780 707 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 GPR12P47775 334 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 RPL30P62888 115 aaKnown RBP15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 DMBX1Q8NFW5 382 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 MMP26Q9NRE1 261 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 CYTL1Q9NRR1 136 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 RCL1Q9Y2P8 373 aaKnown RBP15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 AKAP9Q99996 3911 aa15.33■□□□□ 0.05
EXOSC3-201ENST00000327304 ATG12O94817 140 aa15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 TPT1P13693 172 aaKnown RBP15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 PVALBP20472 110 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 LOXL1Q08397 574 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 C11orf42Q8N5U0 333 aa15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 RNASE11Q8TAA1 199 aaKnown RBP15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 C11orf1Q9H5F2 150 aa15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 ZC4H2Q9NQZ6 224 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms