RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 ACSM6Q6P461 480 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 PDPNQ86YL7 162 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 PTX4Q96A99 478 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 RIMS4Q9H426 269 aaPredicted RBP9.5□□□□□ -0.89
TPM3-204ENST00000323144 SLC35D1Q9NTN3 355 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 TPRKBQ9Y3C4 175 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 SMAD5-AS1Q9Y6J3 95 aa9.5□□□□□ -0.89
TPM3-204ENST00000323144 A0A075B6Q4 140 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 TRDCB7Z8K6 153 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 MFNGO00587 321 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 FABP7O15540 132 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 DENRO43583 198 aaKnown RBP9.49□□□□□ -0.89
TPM3-204ENST00000323144 TRGV3P03979 118 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 FRMD6-AS1P0C7T7 363 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 GP9P14770 177 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 PITPNAQ00169 270 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 TRAM1Q15629 374 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 TBCEQ15813 527 aaPredicted RBP9.49□□□□□ -0.89
TPM3-204ENST00000323144 SRSF7Q16629 238 aaKnown RBP eCLIP9.49□□□□□ -0.893e-11■■■■□ 20.4
TPM3-204ENST00000323144 PYHIN1Q6K0P9 492 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 PRSS48Q7RTY5 328 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 ZNF429Q86V71 674 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 OR56B1Q8NGI3 324 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 HARBI1Q96MB7 349 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 TSNAXQ99598 290 aaKnown RBP9.49□□□□□ -0.89
TPM3-204ENST00000323144 MGLLQ99685 303 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 ZNF230Q9UIE0 474 aaPredicted RBP9.49□□□□□ -0.89
TPM3-204ENST00000323144 ZNF221Q9UK13 617 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 ADAM30Q9UKF2 790 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 MGAT4AQ9UM21 535 aa9.49□□□□□ -0.89
TPM3-204ENST00000323144 IGKV1D-8A0A087WSZ0 117 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 OR8U9P0C7N5 309 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 APELAP0DMC3 54 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 GNB3P16520 340 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 PSMA1P25786 263 aaKnown RBP9.48□□□□□ -0.89
TPM3-204ENST00000323144 RPS16P62249 146 aaKnown RBP9.48□□□□□ -0.89
TPM3-204ENST00000323144 MRGPRG-AS1Q2M3A8 158 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 C2orf76Q3KRA6 126 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 IZUMO2Q6UXV1 221 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 ZNF367Q7RTV3 350 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 NR2C2APQ86WQ0 139 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 POC5Q8NA72 575 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 OR4A4PQ8NGN8 299 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 CNBD2Q96M20 576 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 SDHAF2Q9NX18 166 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 ELF5Q9UKW6 265 aaPredicted RBP9.48□□□□□ -0.89
TPM3-204ENST00000323144 V9GY05 133 aa9.48□□□□□ -0.89
TPM3-204ENST00000323144 SORL1Q92673 2214 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 RBMXL2O75526 392 aaKnown RBP9.47□□□□□ -0.89
TPM3-204ENST00000323144 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 CRYGBP07316 175 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 GSTT2P0CG29 244 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 GSTT2BP0CG30 244 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 HIST1H1DP16402 221 aaKnown RBP9.47□□□□□ -0.89
TPM3-204ENST00000323144 FXYD3Q14802 87 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 AKIRIN2Q53H80 203 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 ZNF562Q6V9R5 426 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.47□□□□□ -0.89
TPM3-204ENST00000323144 OR6Q1Q8NGQ2 317 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 RAB3CQ96E17 227 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 RHOVQ96L33 236 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 RSRP1Q9BUV0 290 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 NDUFB11Q9NX14 153 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 RYR2Q92736 4967 aa9.47□□□□□ -0.89
TPM3-204ENST00000323144 TRBV6-7A0A0A0MS04 114 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 ANKRD34BA5PLL1 514 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 HSPB1P04792 205 aaKnown RBP9.46□□□□□ -0.9
TPM3-204ENST00000323144 TMEM267Q0VDI3 215 aaPredicted RBP9.46□□□□□ -0.9
TPM3-204ENST00000323144 IDO2Q6ZQW0 420 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 BVESQ8NE79 360 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 OR5T1Q8NG75 326 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 OR10R2Q8NGX6 335 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 FLYWCH2Q96CP2 140 aaKnown RBP9.46□□□□□ -0.9
TPM3-204ENST00000323144 RNF5Q99942 180 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 GHITMQ9H3K2 345 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 SLA2Q9H6Q3 261 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 ZNF355PQ9NSJ1 428 aa9.46□□□□□ -0.9
TPM3-204ENST00000323144 STARD9Q9P2P6 4700 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 IFITM5A6NNB3 132 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 SRRM4A7MD48 611 aaKnown RBP9.45□□□□□ -0.9
TPM3-204ENST00000323144 LINC00473A8K010 186 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 RAB27BO00194 218 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 MYL9P24844 172 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 SERPINB10P48595 397 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 MRPS15P82914 257 aaKnown RBP9.45□□□□□ -0.9
TPM3-204ENST00000323144 DYRK1AQ13627 763 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 C10orf55Q5SWW7 151 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 C22orf42Q6IC83 251 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 OR10J5Q8NHC4 309 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 DDB2Q92466 427 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 ACOT13Q9NPJ3 140 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 RAB22AQ9UL26 194 aa9.45□□□□□ -0.9
TPM3-204ENST00000323144 C13orf42A0A1B0GVH6 325 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 H3BUA1 57 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 SHOXO15266 292 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 CNIH1O95406 144 aa9.44□□□□□ -0.9
TPM3-204ENST00000323144 CRYZL1O95825 349 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms