RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 UNQ5815/PRO19632Q6UWF5 114 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 SH2D2AQ9NP31 389 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 A8MXE2 369 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 RER1O15258 196 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 NXPH2O95156 264 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 CLDN1O95832 211 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 SRP14P37108 136 aaKnown RBP9.31□□□□□ -0.92
LSM3-201ENST00000306024 RPL23P62829 140 aaKnown RBP9.31□□□□□ -0.92
LSM3-201ENST00000306024 ZNF439Q8NDP4 499 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 TMEM171Q8WVE6 324 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 NEIL1Q96FI4 390 aaPredicted RBP9.31□□□□□ -0.92
LSM3-201ENST00000306024 PSENENQ9NZ42 101 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 KCNS2Q9ULS6 477 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 CACNA1AO00555 2505 aa9.31□□□□□ -0.92
LSM3-201ENST00000306024 GCH1P30793 250 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 C1QL2Q7Z5L3 287 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 MRPL52Q86TS9 123 aaKnown RBP9.3□□□□□ -0.92
LSM3-201ENST00000306024 GJC3Q8NFK1 279 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 SPTSSAQ969W0 71 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 GTF3C1Q12789 2109 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 HSPB6O14558 160 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 PCBD1P61457 104 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 TBR1Q16650 682 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 TBC1D26Q86UD7 250 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 NANOS1Q8WY41 292 aaKnown RBP9.3□□□□□ -0.92
LSM3-201ENST00000306024 CYYR1Q96J86 154 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 FOXB1Q99853 325 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 FAM206AQ9NX38 181 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 TRGV8A0A0C4DH27 118 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 SPINK4O60575 86 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 PFN1P07737 140 aaKnown RBP9.3□□□□□ -0.92
LSM3-201ENST00000306024 QRFPP83859 136 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 OR5AS1Q8N127 324 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 GLRX2Q9NS18 164 aa9.3□□□□□ -0.92
LSM3-201ENST00000306024 A0A1W2PPV4 95 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 C1QTNF9BB2RNN3 333 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 K7ENP7 123 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 PAGE4O60829 102 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 IL6RP08887 468 aaPredicted RBP9.29□□□□□ -0.92
LSM3-201ENST00000306024 C1QTNF9P0C862 333 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 UBE2V1Q13404 147 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 FBLN7Q53RD9 439 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 OR4A47Q6IF82 309 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 INO80CQ6PI98 192 aaPredicted RBP9.29□□□□□ -0.92
LSM3-201ENST00000306024 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 NUDT10Q8NFP7 164 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 ZNF519Q8TB69 540 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 NUDT11Q96G61 164 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 C20orf144Q9BQM9 153 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 NKX6-3A6NJ46 265 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 GZMHP20718 246 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 LHX2P50458 406 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 SELENOTP62341 195 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 RNFT1Q5M7Z0 435 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 CLEC2AQ6UVW9 174 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 TIMM8BQ9Y5J9 83 aaPredicted RBP9.29□□□□□ -0.92
LSM3-201ENST00000306024 NRASP01111 189 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 KRASP01116 189 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 VDAC1P21796 283 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 IL3RAP26951 378 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 CDKN1BP46527 198 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 OR10G4Q8NGN3 311 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 RNF138Q8WVD3 245 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 IMMP2LQ96T52 175 aa9.29□□□□□ -0.92
LSM3-201ENST00000306024 DOCK11Q5JSL3 2073 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 ADAMTS20P59510 1910 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 PRRC2CQ9Y520 2896 aaKnown RBP9.28□□□□□ -0.92
LSM3-201ENST00000306024 CRYAAP02489 173 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
LSM3-201ENST00000306024 PHYHD1Q5SRE7 291 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 TCF23Q7RTU1 214 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 ST6GALNAC3Q8NDV1 305 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 IL1F10Q8WWZ1 152 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 SPEGQ15772 3267 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 CCL25O15444 150 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 PPYP01298 95 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 PATE4P0C8F1 98 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 TNFSF4P23510 183 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 GFRA1P56159 465 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 CLDN18P56856 261 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 B3GALT5-AS1P59052 145 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 ACTL10Q5JWF8 245 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 FBLN5Q9UBX5 448 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 PROCRQ9UNN8 238 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 CACNA1DQ01668 2161 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 LOC102725191A0A1B0GVB3 256 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 M0QZ24 198 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 CIDEAO60543 219 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 SERF1AO75920 110 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 CD99P14209 185 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 EGR1P18146 543 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 Q5PR19 223 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 FBXW9Q5XUX1 488 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 GGNQ86UU5 652 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 CPT1CQ8TCG5 803 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
LSM3-201ENST00000306024 ST3GAL6Q9Y274 331 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms