RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 PDCD10Q9BUL8 212 aa16.87■□□□□ 0.29
PACSIN3-201ENST00000298838 REG4Q9BYZ8 158 aa16.87■□□□□ 0.29
PACSIN3-201ENST00000298838 PRELID3BQ9Y3B1 194 aa16.87■□□□□ 0.29
PACSIN3-201ENST00000298838 RNF223E7ERA6 249 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 OR2A4O95047 310 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 IFNA21P01568 189 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 MMP9P14780 707 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 RPA2P15927 270 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 NCR3LG1Q68D85 454 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 GSG1LQ6UXU4 331 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 SELENOHQ8IZQ5 122 aaKnown RBP16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 TCTE3Q8IZS6 198 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 OR2A7Q96R45 310 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 ITPR2Q14571 2701 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 DUXBA0A1W2PPF3 345 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 C5orf51A6NDU8 294 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 RAMP3O60896 148 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 KLRD1Q13241 179 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 ZNF585BQ52M93 769 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 LYZL2Q7Z4W2 148 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 OR4P4Q8NGL7 312 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 ST6GALNAC6Q969X2 333 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 C1orf159Q96HA4 380 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 TMED3Q9Y3Q3 217 aa16.86■□□□□ 0.29
PACSIN3-201ENST00000298838 C13orf42A0A1B0GVH6 325 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 BUB1B-PAK6H3BSN5 160 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 ARG1P05089 322 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 HNRNPCP07910 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 KIR2DS2P43631 304 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 PAX8Q06710 450 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 GGNBP1Q5YKI7 109 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 HCP5Q6MZN7 132 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 DDB2Q92466 427 aa16.85■□□□□ 0.29
PACSIN3-201ENST00000298838 HOXB4P17483 251 aaPredicted RBP16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 RAP2BP61225 183 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 TBX15Q96SF7 602 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 ODF3BA8MYP8 253 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 RNASEK-C17orf49H0YIS7 233 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 RBFOX2O43251 390 aaKnown RBP eCLIP16.84■□□□□ 0.291e-8■■■■□ 23.6
PACSIN3-201ENST00000298838 FCGR3BO75015 233 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 CT45A6P0DMU7 189 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 CT45A5P0DMU8 189 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 CT45A7P0DMV0 189 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 VDAC1P21796 283 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 LPAR6P43657 344 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 REG1BP48304 166 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 BRWD1-AS2P59051 145 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 ZNF816Q0VGE8 651 aaPredicted RBP16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 TGIF2LXQ8IUE1 241 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 LINC01356Q8N9X3 169 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 ZNF383Q8NA42 475 aa16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 MRPL20Q9BYC9 149 aaKnown RBP16.84■□□□□ 0.29
PACSIN3-201ENST00000298838 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.83■□□□□ 0.294e-7■□□□□ 11.3
PACSIN3-201ENST00000298838 PDZD2O15018 2839 aa16.83■□□□□ 0.28
PACSIN3-201ENST00000298838 TRAV20A0A0B4J274 112 aa16.83■□□□□ 0.28
PACSIN3-201ENST00000298838 MPTX1A8MV57 137 aa16.83■□□□□ 0.28
PACSIN3-201ENST00000298838 SRSF4Q08170 494 aaKnown RBP16.83■□□□□ 0.28
PACSIN3-201ENST00000298838 OR2T35Q8NGX2 323 aa16.83■□□□□ 0.28
PACSIN3-201ENST00000298838 FOXC2Q99958 501 aa16.83■□□□□ 0.28
PACSIN3-201ENST00000298838 CSMD1Q96PZ7 3565 aa16.83■□□□□ 0.28
PACSIN3-201ENST00000298838 ATG12O94817 140 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 IGKV1-39P01597 117 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 IGKV1D-39P04432 117 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 HTR1DP28221 377 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 AKR1C2P52895 323 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 DIAPH2-AS1Q14236 149 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 PDZD9Q8IXQ8 264 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 OR4S2Q8NH73 311 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 RNASE11Q8TAA1 199 aaKnown RBP16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 RPEQ96AT9 228 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 SEC22AQ96IW7 307 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 OR10C1Q96KK4 312 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 BOLA2-SMG1P6H3BVE0 249 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 TXNL1O43396 289 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 S1PR2O95136 353 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 GATA3P23771 443 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 CYCSP99999 105 aaKnown RBP16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 TAGLNQ01995 201 aaKnown RBP16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 IAH1Q2TAA2 248 aaPredicted RBP16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 MAPK1IP1LQ8NDC0 245 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 PLEKHA2Q9HB19 425 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 HIF1ANQ9NWT6 349 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 CREBBPQ92793 2442 aa16.82■□□□□ 0.28
PACSIN3-201ENST00000298838 CCDC168Q8NDH2 2452 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 CR1P17927 2039 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 PRRC2AP48634 2157 aaKnown RBP16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 LEUTXA8MZ59 168 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 HPRT1P00492 218 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 APOA2P02652 100 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 CEACAM3P40198 252 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 RTL8BQ17RB0 113 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 ZFP69Q49AA0 526 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 OR5AN1Q8NGI8 311 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 LHX4Q969G2 390 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 RRNAD1Q96FB5 475 aaKnown RBP16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 WDR89Q96FK6 387 aaPredicted RBP16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 C2orf50Q96LR7 162 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 NABP2Q9BQ15 211 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 NMES1Q9C002 83 aa16.81■□□□□ 0.28
PACSIN3-201ENST00000298838 DPM3Q9P2X0 92 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms