RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 IGKV1-6A0A0C4DH72 117 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 FABP12A6NFH5 140 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 IFITM5A6NNB3 132 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 H0YJW9 148 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 I3L521 148 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 RAB29O14966 203 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 LDLRAD4O15165 306 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 HPGDSO60760 199 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 SCTP09683 121 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 EGR2P11161 476 aaPredicted RBP7.42□□□□□ -1.22
HMHB1-201ENST00000289448 TALDO1P37837 337 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 VEGFCP49767 419 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 LINC00205P59089 165 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 RAB11BQ15907 218 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 RGS21Q2M5E4 152 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 C19orf54Q5BKX5 351 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 PLAC9Q5JTB6 97 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 LIN54Q6MZP7 749 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 CNIH2Q6PI25 160 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 ZNF491Q8N8L2 437 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 GDPD1Q8N9F7 314 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 MINDY2Q8NBR6 621 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 C4orf3Q8WVX3 66 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 DPF1Q92782 380 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 FAM3DQ96BQ1 224 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 ARHGAP5-AS1Q96IT6 56 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 CMTM3Q96MX0 182 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 OR5B12Q96R08 314 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 SOSTQ9BQB4 213 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 C11orf54Q9H0W9 315 aaPredicted RBP7.42□□□□□ -1.22
HMHB1-201ENST00000289448 FBXL15Q9H469 300 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 Q9N2K0 584 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 PARP11Q9NR21 331 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 RNF150Q9ULK6 438 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 HSF4Q9ULV5 492 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 HUWE1Q7Z6Z7 4374 aaKnown RBP7.42□□□□□ -1.22
HMHB1-201ENST00000289448 SORL1Q92673 2214 aa7.42□□□□□ -1.22
HMHB1-201ENST00000289448 TRAV41A0A0B4J266 112 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 FAM25AB3EWG3 89 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 FAM25CB3EWG5 89 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 FAM25GB3EWG6 89 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 SOX15O60248 233 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 APOA1P02647 267 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 OR5H8P0DN80 308 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 CEACAM6P40199 344 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 SCAND1P57086 179 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 GNB1P62873 340 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 CX3CL1P78423 397 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 HLA-DRB3P79483 266 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 DGCR2P98153 550 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 ZNF79Q15937 498 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 C2orf76Q3KRA6 126 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 VAX1Q5SQQ9 334 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 FAM71F2Q6NXP2 309 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 MOB1BQ7L9L4 216 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 SAMD12Q8N8I0 201 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 DRAXINQ8NBI3 349 aaPredicted RBP7.41□□□□□ -1.22
HMHB1-201ENST00000289448 OR11H1Q8NG94 326 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 OR5AN1Q8NGI8 311 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 OR5M8Q8NGP6 311 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 CASTOR1Q8WTX7 329 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 UBE2E2Q96LR5 201 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 SDHCQ99643 169 aaPredicted RBP7.41□□□□□ -1.22
HMHB1-201ENST00000289448 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 URM1Q9BTM9 101 aaKnown RBP7.41□□□□□ -1.22
HMHB1-201ENST00000289448 PECRQ9BY49 303 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 SRRQ9GZT4 340 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 RIMS4Q9H426 269 aaPredicted RBP7.41□□□□□ -1.22
HMHB1-201ENST00000289448 PIPOXQ9P0Z9 390 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 RABL2AQ9UBK7 228 aaPredicted RBP7.41□□□□□ -1.22
HMHB1-201ENST00000289448 SPATA2Q9UM82 520 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 RABL2BQ9UNT1 228 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 GAB2Q9UQC2 676 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 KCNK7Q9Y2U2 307 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 ETV7Q9Y603 341 aa7.41□□□□□ -1.22
HMHB1-201ENST00000289448 TMEM272A0A1B0GTI8 110 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 SEC14L6B5MCN3 397 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 ITGB1BP1O14713 200 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 RRHO14718 337 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 IGKV1-16P04430 117 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 CD3GP09693 182 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 ELK1P19419 428 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 ZBTB25P24278 435 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 RANBP1P43487 201 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 RAB9AP51151 201 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 CRIP2P52943 208 aaPredicted RBP7.4□□□□□ -1.22
HMHB1-201ENST00000289448 DEFA1P59665 94 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 DEFA3P59666 94 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 RUNX1Q01196 453 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 IFITM3Q01628 133 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 MOGAT2Q3SYC2 334 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 HES5Q5TA89 166 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 TMEM65Q6PI78 240 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 LYSMD2Q8IV50 215 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 ZNF383Q8NA42 475 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 OR1N2Q8NGR9 330 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 LGALS14Q8TCE9 139 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 PTX4Q96A99 478 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 PRR25Q96S07 402 aa7.4□□□□□ -1.22
HMHB1-201ENST00000289448 CMSS1Q9BQ75 279 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms