RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 RPL30P62888 115 aaKnown RBP10.15□□□□□ -0.78
SS18-202ENST00000269138 SSBP1Q04837 148 aaKnown RBP10.15□□□□□ -0.78
SS18-202ENST00000269138 EIF4EBP1Q13541 118 aaPredicted RBP10.15□□□□□ -0.78
SS18-202ENST00000269138 ABCA11PQ4W5N1 156 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 RNASE10Q5GAN6 216 aaKnown RBP10.15□□□□□ -0.78
SS18-202ENST00000269138 VAX1Q5SQQ9 334 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 OR4C13Q8NGP0 309 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 OR6F1Q8NGZ6 308 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 MOB3AQ96BX8 217 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 THAP7Q9BT49 309 aaPredicted RBP10.15□□□□□ -0.78
SS18-202ENST00000269138 FXYD6Q9H0Q3 95 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 C16orf95Q9H693 158 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 WASHC3Q9Y3C0 194 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 TNFSF12O43508 249 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 SLC22A5O76082 557 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 RAB3DO95716 219 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 IGKV1-16P04430 117 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 GNRHRP30968 328 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 MC5RP33032 325 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 THBS3P49746 956 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
SS18-202ENST00000269138 TAS2R19P59542 299 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 FOXL1Q12952 345 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 ACTBL2Q562R1 376 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 SPANXN2Q5MJ10 180 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 FAAP20Q6NZ36 180 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 STEAP1BQ6NZ63 245 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 C11orf88Q6PI97 169 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 Q8N9W7 124 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 BVESQ8NE79 360 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 DDB2Q92466 427 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 AKR1E2Q96JD6 320 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 PRSS22Q9GZN4 317 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 RANBP3Q9H6Z4 567 aaPredicted RBP10.14□□□□□ -0.79
SS18-202ENST00000269138 SLC35D1Q9NTN3 355 aa10.14□□□□□ -0.79
SS18-202ENST00000269138 ANKRD20A5PA0PJZ0 165 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 CLPSL1A2RUU4 121 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 PEX14O75381 377 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 APOA2P02652 100 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 IFNA6P05013 189 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 ZNF735P0CB33 412 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 PTBP1P26599 531 aaKnown RBP eCLIP10.13□□□□□ -0.793e-9■■■■□ 23.3
SS18-202ENST00000269138 MMDQ15546 238 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 TMEM95Q3KNT9 176 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 C9orf152Q5JTZ5 239 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 ZNF818PQ6ZRF7 136 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 Q8N2B8 174 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 Q8N402 240 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 BEX1Q9HBH7 125 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 TAS2R8Q9NYW2 309 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 ZNF107Q9UII5 783 aaPredicted RBP10.13□□□□□ -0.79
SS18-202ENST00000269138 MMP24Q9Y5R2 645 aa10.13□□□□□ -0.79
SS18-202ENST00000269138 M0QZK8 103 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 FGF16O43320 207 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 CSF1P09603 554 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 TBPP20226 339 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 BRWD1-AS2P59051 145 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 OR2B11Q5JQS5 317 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 AADACL3Q5VUY0 350 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 C12orf54Q6X4T0 127 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 PDPNQ86YL7 162 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 OR4C16Q8NGL9 310 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 TRIM63Q969Q1 353 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 ADTRPQ96IZ2 230 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 SDHCQ99643 169 aaPredicted RBP10.12□□□□□ -0.79
SS18-202ENST00000269138 RNF114Q9Y508 228 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 LINC01548A6NM66 108 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 HAX1O00165 279 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 NBR2O15453 112 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 FCGR3BO75015 233 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 AKAIN1P0CW23 69 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 PROK1P58294 105 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 RPS16P62249 146 aaKnown RBP10.12□□□□□ -0.79
SS18-202ENST00000269138 MSMO1Q15800 293 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 KCTD9Q7L273 389 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 LHFPL1Q86WI0 220 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 FAM71E2Q8N5Q1 922 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 NPBQ8NG41 125 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 OR8H1Q8NGG4 311 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 TCTEX1D2Q8WW35 142 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 FLYWCH2Q96CP2 140 aaKnown RBP10.12□□□□□ -0.79
SS18-202ENST00000269138 HSD17B10Q99714 261 aaKnown RBP10.12□□□□□ -0.79
SS18-202ENST00000269138 FBXL15Q9H469 300 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
SS18-202ENST00000269138 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 SRRM4A7MD48 611 aaKnown RBP10.11□□□□□ -0.79
SS18-202ENST00000269138 CRYZL1O95825 349 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 KRTAP10-3P60369 221 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 SRSF4Q08170 494 aaKnown RBP10.11□□□□□ -0.79
SS18-202ENST00000269138 KLF9Q13886 244 aaPredicted RBP10.11□□□□□ -0.79
SS18-202ENST00000269138 PSG5Q15238 335 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 BAK1Q16611 211 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 RTL8BQ17RB0 113 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 SCGB2B2Q4G0G5 96 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 PHLDA2Q53GA4 152 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 ZNF66Q6ZN08 573 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms