RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RAB37Q96AX2 223 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 Q96M66 194 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 NEU1Q99519 415 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 AUP1Q9Y679 476 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
NEK4-201ENST00000233027 TRGC1P0CF51 173 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 MPV17P39210 176 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 DNLZQ5SXM8 178 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 ZNF646O15015 1829 aaPredicted RBP11.49□□□□□ -0.57
NEK4-201ENST00000233027 A8MWL6 223 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 DLL1O00548 723 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 DANCRP0C864 163 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 CD82P27701 267 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 TNFRSF9Q07011 255 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 POC1AQ8NBT0 407 aa11.49□□□□□ -0.57
NEK4-201ENST00000233027 GFRA1P56159 465 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 SLC25A53Q5H9E4 307 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 LOXL3P58215 753 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 CBLN4Q9NTU7 201 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 HSPB7Q9UBY9 170 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 AGAP20933 346 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 DDTP30046 118 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 EGR4Q05215 589 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 OR51M1Q9H341 326 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 SPAG17Q6Q759 2223 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 EGR1P18146 543 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 CRYBB3P26998 211 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 SMIM10L1P0DMW3 83 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 SRIP30626 198 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
NEK4-201ENST00000233027 SMIM10Q96HG1 83 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 TMEM74BQ9NUR3 256 aa11.48□□□□□ -0.57
NEK4-201ENST00000233027 IGHV3-48P01763 117 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 CKS2P33552 79 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 FAM214BQ7L5A3 538 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 SLC25A45Q8N413 288 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 POLR2AP24928 1970 aaKnown RBP11.47□□□□□ -0.57
NEK4-201ENST00000233027 ABHD12Q8N2K0 398 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 GCSAMQ8N6F7 178 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 GUCD1Q96NT3 240 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 ARID1AO14497 2285 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 CDK2AP1O14519 115 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 RND2P52198 227 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
NEK4-201ENST00000233027 RPL8P62917 257 aaKnown RBP11.47□□□□□ -0.57
NEK4-201ENST00000233027 PARLQ9H300 379 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 CCL21O00585 134 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 MPDU1O75352 247 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 PRF1P14222 555 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 C2orf68Q2NKX9 166 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 TMEM177Q53S58 311 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 ASPHD2Q6ICH7 369 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 QTRT1Q9BXR0 403 aaKnown RBP11.47□□□□□ -0.57
NEK4-201ENST00000233027 CRYBA2P53672 197 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 DYNLRB2Q8TF09 96 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 MARS2Q96GW9 593 aaKnown RBP11.47□□□□□ -0.57
NEK4-201ENST00000233027 C16orf92Q96LL3 132 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 DDA1Q9BW61 102 aa11.47□□□□□ -0.57
NEK4-201ENST00000233027 AKIRIN1Q9H9L7 192 aaPredicted RBP11.47□□□□□ -0.57
NEK4-201ENST00000233027 F11RQ9Y624 299 aaKnown RBP11.47□□□□□ -0.57
NEK4-201ENST00000233027 IGKV3D-15A0A087WSY6 115 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 GAGE10A6NGK3 116 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 MARCH11A6NNE9 402 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 IGKV3-15P01624 115 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 OR4A5Q8NH83 315 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 LSM10Q969L4 123 aaKnown RBP11.46□□□□□ -0.57
NEK4-201ENST00000233027 WNT5BQ9H1J7 359 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 FCGR2BP31994 310 aaPredicted RBP11.46□□□□□ -0.57
NEK4-201ENST00000233027 MAS1LP35410 378 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 IDI2-AS1Q9NZ38 188 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 TMEM229AB2RXF0 380 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 STAG3L2P0CL84 134 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 ZNF708P17019 499 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 CDCP2Q5VXM1 449 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 TMEM45BQ96B21 275 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 SCNM1Q9BWG6 230 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 CALYQ9NYX4 217 aa11.46□□□□□ -0.57
NEK4-201ENST00000233027 A0A1B0GV90 55 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 CDX1P47902 265 aaPredicted RBP11.46□□□□□ -0.58
NEK4-201ENST00000233027 GLIPR1P48060 266 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 GGACTQ9BVM4 153 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 TMEM14DPA8MWL7 114 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 NKX2-8O15522 239 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 SLC25A17O43808 307 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 ZNF324O75467 553 aaPredicted RBP11.46□□□□□ -0.58
NEK4-201ENST00000233027 LEPROTL1O95214 131 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 IGHMP01871 453 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 MT-ND6P03923 174 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 ID1P41134 155 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 KCNMB1Q16558 191 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 PMS2CLQ68D20 193 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.58
NEK4-201ENST00000233027 ZNF430Q9H8G1 570 aaPredicted RBP11.46□□□□□ -0.58
NEK4-201ENST00000233027 ERVFRD-1P60508 538 aa11.45□□□□□ -0.58
NEK4-201ENST00000233027 CTHRC1Q96CG8 243 aa11.45□□□□□ -0.58
NEK4-201ENST00000233027 LOC107984156A0A0G2JMH3 177 aa11.45□□□□□ -0.58
NEK4-201ENST00000233027 TMEM78Q5T7P6 136 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms