RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 IFNA21P01568 189 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 MSMBP08118 114 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 GIPP09681 153 aaPredicted RBP12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 RPA2P15927 270 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 THBS3P49746 956 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 GSG1LQ6UXU4 331 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 SLC35G3Q8N808 338 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 CD300LFQ8TDQ1 290 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 ASB13Q8WXK3 278 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 DDB2Q92466 427 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 Q96MF0 132 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 PCGF1Q9BSM1 259 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 PRELID3BQ9Y3B1 194 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 ABCA2Q9BZC7 2435 aa12.97□□□□□ -0.33
SNRPD3-201ENST00000215829 C13orf42A0A1B0GVH6 325 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 DUXBA0A1W2PPF3 345 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 C5orf51A6NDU8 294 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 RNF223E7ERA6 249 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 RAMP3O60896 148 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 CT45A6P0DMU7 189 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 CT45A5P0DMU8 189 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 CT45A7P0DMV0 189 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 SRSF4Q08170 494 aaKnown RBP12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 OR2B11Q5JQS5 317 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 GGNBP1Q5YKI7 109 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 ZNF383Q8NA42 475 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 OR4P4Q8NGL7 312 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 TBX15Q96SF7 602 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 TMED3Q9Y3Q3 217 aa12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 AMMECR1Q9Y4X0 333 aaPredicted RBP12.96□□□□□ -0.34
SNRPD3-201ENST00000215829 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 IGKV1-39P01597 117 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 IGKV1D-39P04432 117 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 ARG1P05089 322 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 HOXB4P17483 251 aaPredicted RBP12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 KIR2DS2P43631 304 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 LPAR6P43657 344 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 RAP2BP61225 183 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 KLRD1Q13241 179 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 WDR89Q96FK6 387 aaPredicted RBP12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 SEC22AQ96IW7 307 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 PDCD10Q9BUL8 212 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 UNC79Q9P2D8 2635 aa12.95□□□□□ -0.34
SNRPD3-201ENST00000215829 ODF3BA8MYP8 253 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 RNASEK-C17orf49H0YIS7 233 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.344e-7■□□□□ 8.3
SNRPD3-201ENST00000215829 FCGR3BO75015 233 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 VDAC1P21796 283 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 DIAPH2-AS1Q14236 149 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 LINC01356Q8N9X3 169 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 OR10C1Q96KK4 312 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 FOXC2Q99958 501 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 MAP1AP78559 2803 aaPredicted RBP12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 LY6LH3BQJ8 138 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 REG1BP48304 166 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 ZNF816Q0VGE8 651 aaPredicted RBP12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 TGIF2LXQ8IUE1 241 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 C2orf50Q96LR7 162 aa12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 MRPL20Q9BYC9 149 aaKnown RBP12.94□□□□□ -0.34
SNRPD3-201ENST00000215829 PDZD2O15018 2839 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 TRAV20A0A0B4J274 112 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 HPRT1P00492 218 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 HTR1DP28221 377 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 UBE2E1P51965 193 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 CYCSP99999 105 aaKnown RBP12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 TAGLNQ01995 201 aaKnown RBP12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 PDZD9Q8IXQ8 264 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 OR2T35Q8NGX2 323 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 NABP2Q9BQ15 211 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 NMES1Q9C002 83 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 PLEKHA2Q9HB19 425 aa12.93□□□□□ -0.34
SNRPD3-201ENST00000215829 LEUTXA8MZ59 168 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 SMLR1H3BR10 107 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 S1PR2O95136 353 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 GAPDHP04406 335 aaKnown RBP12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 GATA3P23771 443 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 IAH1Q2TAA2 248 aaPredicted RBP12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 NMSQ5H8A3 153 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 MAPK1IP1LQ8NDC0 245 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 OR5AN1Q8NGI8 311 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 OR4S2Q8NH73 311 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 LHX4Q969G2 390 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 LSM10Q969L4 123 aaKnown RBP12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 DPM3Q9P2X0 92 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 HECTD1Q9ULT8 2610 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 ATG12O94817 140 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 IGKV1-5P01602 117 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 ZFP69Q49AA0 526 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 LDLRAD2Q5SZI1 272 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 RPEQ96AT9 228 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 SLC35D1Q9NTN3 355 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 AUP1Q9Y679 476 aa12.92□□□□□ -0.34
SNRPD3-201ENST00000215829 CSMD1Q96PZ7 3565 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 ITPR2Q14571 2701 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 A0A1W2PRD5 423 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 A0A1W2PRF3 423 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms