RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Cited4Q9WUL8 182 aa11.18□□□□□ -0.62
Nup88-203ENSMUST00000108531 Cldn14Q9Z0S3 239 aa11.18□□□□□ -0.62
Nup88-203ENSMUST00000108531 DeddQ9Z1L3 318 aa11.18□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ighv1-76A0A0G2JFE9 117 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr785A0A0N4SVC3 312 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 A0A286YD13 301 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm13083A2AGW5 501 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Fthl17bA2AHC5 176 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Fthl17cA2AHC6 176 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr1029A2ATE0 324 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Eid2bE9Q2Y0 151 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Fthl17fQ3SXD2 176 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Nr2c2apQ3TV70 140 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Jagn1Q5XKN4 183 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr1028Q7TR89 324 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Dirc2Q8BFQ6 478 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Scrt2Q8BTH6 311 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Zbtb49Q8BXX2 756 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Q8VE95 218 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr994Q8VF73 314 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr1392Q8VFA6 311 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Fyttd1Q91Z49 317 aaKnown RBP11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Defb5Q9EPV9 64 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Tbl1xQ9QXE7 527 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 MioxQ9QXN5 285 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gpr37Q9QY42 600 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Brca2P97929 3329 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 DmdP11531 3678 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Cyb561d1A2AE42 229 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Adam6aB2RSY5 754 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Nxpe5E0CX47 564 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm6526G3X9Q9 198 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm10097J3KMK7 105 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr194L7N1Y8 306 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr203L7N205 307 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ppp1ccP63087 323 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Prrc1Q3UPH1 443 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 IslrQ6GU68 428 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Zfp677Q6PEP4 634 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Zdhhc25Q810M4 279 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Plcxd3Q8BLJ3 321 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Vmn1r89Q8R256 316 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Sft2d2Q8VD57 159 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr446Q8VEV0 308 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 RhebQ921J2 184 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Bcl2l14Q9CPT0 328 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Htra3Q9D236 459 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Zfpl1Q9DB43 310 aa11.17□□□□□ -0.62
Nup88-203ENSMUST00000108531 Trav12-1A0N8R1 115 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr250E9PV37 331 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 P01680 129 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Cd79aP11911 220 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Hspb1P14602 209 aaKnown RBP11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rac3P60764 192 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Btg2Q04211 158 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr1507Q0VEP0 313 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Mcrip1Q3UGS4 97 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gal3st2cQ3ULK5 396 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Pate2Q3UW31 111 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Vdac2Q60930 295 aaKnown RBP11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rps19bp1Q8C6B9 143 aaKnown RBP11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Lrrc25Q8K1T1 297 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Mbnl3Q8R003 342 aaKnown RBP11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rab5aQ9CQD1 215 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 4933400A11RikQ9CR52 288 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Tmem50aQ9CXL1 157 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ints12Q9D168 461 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Srp19Q9D7A6 144 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 NmuQ9QXK8 174 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr155Q9QZ22 319 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 S1pr3Q9Z0U9 378 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Cxcl1P12850 96 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 MyogP12979 224 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 TspoP50637 169 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ascl1Q02067 231 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Trav5d-4Q5R1F6 114 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Smim12Q78RX3 92 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Zfp455Q7M6X9 461 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm13757Q7TR17 305 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm26558Q8BLW8 286 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Pla2g3Q8BZT7 504 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr638Q8VH20 321 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Wbp2nlQ9D529 359 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rpl7l1Q9D8M4 246 aaKnown RBP11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 BlnkQ9QUN3 457 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rad1Q9QWZ1 280 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Xcr1Q9R0M1 322 aa11.16□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ighv6-5A0A0A6YWS9 119 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm20219A0A1B0GRQ3 87 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr587-ps1A0A1B0GSS1 159 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm6880A3KG45 208 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Vmn1r129E9QA94 307 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm8720K9J7F4 307 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Mtatp6P00848 226 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 B4galt1P15535 399 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr921Q7TRC0 313 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 RflnaQ7TS73 204 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 TskuQ8CBR6 354 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Myct1Q8R411 188 aa11.15□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr512Q8VFZ4 326 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms