RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Olfr488Q8VG02 314 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Srsf9Q9D0B0 222 aaKnown RBP10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Slc48a1Q9D8M3 146 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Wdr4Q9EP82 413 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Kcnj10Q9JM63 379 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Prg4Q9JM99 1054 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 AfdnQ9QZQ1 1820 aaKnown RBP10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Trav23A0A0G2JG17 115 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Vmn1r149E9PWL6 307 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Vmn1r101E9Q365 307 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Vmn1r158G3UY92 307 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Apobec1P51908 229 aaKnown RBP10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Hist1h2baP70696 127 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Nkx3-1P97436 237 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 CbarpQ66L44 698 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Olfr967Q7TRA6 310 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Tceal5Q8CCT4 200 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Irf2bp1Q8R3Y8 584 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Tmem147Q9CQG6 224 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Glipr2Q9CYL5 154 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Ccl26F8VQM2 93 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Gm20821J3QPJ2 227 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 LifP09056 203 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Tmem217Q14AF1 189 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Slc38a11Q3USY0 453 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Cox14Q8BH51 57 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 LssQ8BLN5 733 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Rab29Q91YQ1 204 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Mpc2Q9D023 127 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Rab37Q9JKM7 223 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Csnk1eQ9JMK2 416 aaKnown RBP10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Pex11bQ9Z210 259 aa10.91□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Arfgef2A2A5R2 1792 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Olfr284A0A0U1RP76 321 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Cyb561d1A2AE42 229 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Fam170bE9PXT9 378 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Nipsnap2O55126 281 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Tbxa2rP30987 341 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Trat1Q3UU67 187 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Gpr4Q8BUD0 365 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Ceacam11Q9D0Z8 303 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 TpbgQ9Z0L0 426 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Pom121l12A0A1B0GSJ4 278 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 D830044I16RikA0A1D5RM53 117 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Gm8653K9J7G2 307 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Vmn1r117L7N2C9 307 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Pet117P0DJF2 80 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Igfbp3P47878 292 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Sap30lQ5SQF8 182 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Npy4rQ61041 375 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Cd55Q61475 390 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Q8BTG6 205 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Lsm11Q8BUV6 361 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Pdlim5Q8CI51 591 aaKnown RBP10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Osr2Q91ZD1 312 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Mcts2Q9CQ21 181 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Cldn34c3J3QJW5 233 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Siva1O54926 175 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Best1O88870 551 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 C1ql1O88992 258 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Olfr149Q60888 311 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Samd10Q7TST3 202 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Prrg4Q8BGN6 226 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Gm9837Q8C607 126 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Klk15Q8CGR4 254 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Degs2Q8R2F2 323 aa10.9□□□□□ -0.66
Pcdhac1-201ENSMUST00000007584 Gm10130F6ZHM5 101 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Ifna4P07351 186 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Oprk1P33534 380 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Ucp3P56501 308 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Gm1673Q3UR78 90 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Q497N7 227 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Hs3st2Q673U1 367 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Mogat2Q80W94 334 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Scrt2Q8BTH6 311 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Gp2Q9D733 531 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Q9DAF8 208 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Susd2Q9DBX3 820 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Ctnnbip1Q9JJN6 81 aa10.9□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Prrt2E9PUL5 346 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Spata31d1cE9QAF1 853 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Fam240aJ3QNP9 97 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 FahP35505 419 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Atp5iQ06185 71 aaKnown RBP10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Olfr965Q7TRA7 312 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Slc45a1Q8BIV7 751 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Sval2Q99N75 144 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Nkain4Q9JMG4 208 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Cldn34c2J3QNM1 233 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Klf9O35739 244 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 P01670 111 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 P01671 111 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 P01672 111 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 CrpP14847 225 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Fkbp2P45878 140 aaKnown RBP10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Olfr148Q60887 310 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Q8C784 167 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Cldn34c1Q8K193 234 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Rhbdd2Q8VEK2 361 aa10.89□□□□□ -0.67
Pcdhac1-201ENSMUST00000007584 Tm4sf5Q91XF2 196 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms