RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 CABLES2Q9BTV7 478 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 DCSTAMPQ9H295 470 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 DIABLOQ9NR28 239 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-207ENST00000634712 WASHC3Q9Y3C0 194 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 CMYA5Q8N3K9 4069 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 TRAV18A0A075B6X5 111 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 TMEM235A6NFC5 223 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 ADARB2-AS1A8MUL3 147 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 TFAP2AP05549 437 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 PLGLAQ15195 96 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 ZNF260Q3ZCT1 412 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 Q6ZS49 121 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 DRAXINQ8NBI3 349 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-207ENST00000634712 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.39□□□□□ -0.43
LINC00339-207ENST00000634712 RITA1Q96K30 269 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 TOLLIPQ9H0E2 274 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 SPATA2Q9UM82 520 aa12.39□□□□□ -0.43
LINC00339-207ENST00000634712 A0A0A6YYH2 397 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 A6NJ64 397 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 H0YJW9 148 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 M0R1X1 148 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 RBBP9O75884 186 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 APOA2P02652 100 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 PF4P02776 101 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 CTXN2P0C2S0 81 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 VDAC1P21796 283 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 CNTFRP26992 372 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 TGFBR1P36897 503 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 RPS19P39019 145 aaKnown RBP12.38□□□□□ -0.43
LINC00339-207ENST00000634712 DEFA6Q01524 100 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 LIN54Q6MZP7 749 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 NPBQ8NG41 125 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 OR5AN1Q8NGI8 311 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 NUDCD2Q8WVJ2 157 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 HSPB9Q9BQS6 159 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 OR2D2Q9H210 308 aa12.38□□□□□ -0.43
LINC00339-207ENST00000634712 TRIM64CA6NLI5 447 aa12.37□□□□□ -0.43
LINC00339-207ENST00000634712 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
LINC00339-207ENST00000634712 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
LINC00339-207ENST00000634712 S100A16Q96FQ6 103 aaKnown RBP12.37□□□□□ -0.43
LINC00339-207ENST00000634712 RNF5Q99942 180 aa12.37□□□□□ -0.43
LINC00339-207ENST00000634712 FUNDC2Q9BWH2 189 aa12.37□□□□□ -0.43
LINC00339-207ENST00000634712 ZFP57Q9NU63 452 aa12.37□□□□□ -0.43
LINC00339-207ENST00000634712 GAB2Q9UQC2 676 aa12.37□□□□□ -0.43
LINC00339-207ENST00000634712 IGKV1D-8A0A087WSZ0 117 aa12.36□□□□□ -0.43
LINC00339-207ENST00000634712 NUDT19A8MXV4 375 aa12.36□□□□□ -0.43
LINC00339-207ENST00000634712 OR5H8P0DN80 308 aa12.36□□□□□ -0.43
LINC00339-207ENST00000634712 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
LINC00339-207ENST00000634712 CBX3Q13185 183 aa12.36□□□□□ -0.43
LINC00339-207ENST00000634712 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
LINC00339-207ENST00000634712 CNIH2Q6PI25 160 aa12.36□□□□□ -0.43
LINC00339-207ENST00000634712 J3QRK9 145 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 RRHO14718 337 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 PROP1O75360 226 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 NDUFA3O95167 84 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 HLA-DRB1P01911 266 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 CD33P20138 364 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
LINC00339-207ENST00000634712 PDPNQ86YL7 162 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 C1QL4Q86Z23 238 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 H1FOOQ8IZA3 346 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-207ENST00000634712 ZNF383Q8NA42 475 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
LINC00339-207ENST00000634712 TSNAXQ99598 290 aaKnown RBP12.35□□□□□ -0.43
LINC00339-207ENST00000634712 OR51J1Q9H342 316 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 FBXL15Q9H469 300 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 PARP11Q9NR21 331 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 SLC35D1Q9NTN3 355 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 SDHAF2Q9NX18 166 aa12.35□□□□□ -0.43
LINC00339-207ENST00000634712 SSX5O60225 188 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 IGF1P05019 195 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 LUMP51884 338 aaPredicted RBP12.34□□□□□ -0.43
LINC00339-207ENST00000634712 LINC00205P59089 165 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 ARPC4P59998 168 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 VBP1P61758 197 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
LINC00339-207ENST00000634712 UBE2NLQ5JXB2 153 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 SAMD12Q8N8I0 201 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 OR13F1Q8NGS4 319 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 METTL1Q9UBP6 276 aaKnown RBP12.34□□□□□ -0.43
LINC00339-207ENST00000634712 ANXA10Q9UJ72 324 aa12.34□□□□□ -0.43
LINC00339-207ENST00000634712 IGHV7-81A0A0B4J1V7 117 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 XRCC3O43542 346 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 ELANEP08246 267 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 NFYAP23511 347 aaPredicted RBP12.33□□□□□ -0.44
LINC00339-207ENST00000634712 THBS3P49746 956 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 NCS1P62166 190 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 FOXE3Q13461 319 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 KLHL30-AS1Q8NEE0 82 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 BEST4Q8NFU0 473 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 ABHD5Q8WTS1 349 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 SLC25A46Q96AG3 418 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 KCTD12Q96CX2 325 aaKnown RBP12.33□□□□□ -0.44
LINC00339-207ENST00000634712 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 CLCC1Q96S66 551 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
LINC00339-207ENST00000634712 OR2W1Q9Y3N9 320 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms