RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 ZNF436Q9C0F3 470 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-220ENST00000628906 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 H3BNX3 289 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 UBDO15205 165 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 GATBO75879 557 aaKnown RBP4.03□□□□□ -1.76
LINC00649-220ENST00000628906 CLEC3BP05452 202 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 CRYGBP07316 175 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 ZNF3P17036 446 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 ALOX5APP20292 161 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 SLC1A6P48664 564 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 MTCP1P56278 107 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 DEFB131AP59861 70 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 HTD2P86397 168 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 RIPK1Q13546 671 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 ALKBH1Q13686 389 aaKnown RBP4.03□□□□□ -1.76
LINC00649-220ENST00000628906 CRMP1Q14194 572 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 LEMD1Q68G75 181 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 FAM71F2Q6NXP2 309 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 ZNF705AQ6ZN79 300 aaPredicted RBP4.03□□□□□ -1.76
LINC00649-220ENST00000628906 TRMT10CQ7L0Y3 403 aaKnown RBP4.03□□□□□ -1.76
LINC00649-220ENST00000628906 TTC9CQ8N5M4 171 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 OR10V1Q8NGI7 309 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 UBLCP1Q8WVY7 318 aaPredicted RBP4.03□□□□□ -1.76
LINC00649-220ENST00000628906 MRPS24Q96EL2 167 aaKnown RBP4.03□□□□□ -1.76
LINC00649-220ENST00000628906 ABHD14AQ9BUJ0 271 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 TM2D1Q9BX74 207 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 GORASP2Q9H8Y8 452 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 DAZ1Q9NQZ3 744 aaKnown RBP4.03□□□□□ -1.76
LINC00649-220ENST00000628906 AASSQ9UDR5 926 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 ENOPH1Q9UHY7 261 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 HSF4Q9ULV5 492 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 ING4Q9UNL4 249 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 WASHC3Q9Y3C0 194 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 V9GYQ6 96 aa4.03□□□□□ -1.76
LINC00649-220ENST00000628906 SAA2-SAA4A0A096LPE2 208 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 TRAV3A0A0B4J244 114 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 IGKV1-9A0A0C4DH69 117 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 TRPC5OSA6NMA1 111 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF705FA8MVS1 300 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 H7C2Y5 167 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 K7EMT4 169 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 SPINT2O43291 252 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 PROP1O75360 226 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 SRSF10O75494 262 aaKnown RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 SERPINA3P01011 423 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 IGLV2-8P01709 118 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 IGHV3-23P01764 117 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 IGKV1-16P04430 117 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF705DP0CH99 300 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF705BP0CI00 300 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 SAA2P0DJI9 122 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 CCL1P22362 96 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 KDELR2P33947 212 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 TFPI2P48307 235 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 DAD1P61803 113 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 IRF3Q14653 427 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 ESRGQ1W209 222 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 FAM90A2PQ658T7 463 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 GLDNQ6ZMI3 551 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 SAXO1Q8IYX7 474 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 ELMOD2Q8IZ81 293 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 TMEM190Q8WZ59 177 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 TPD52L3Q96J77 140 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 NR1H4Q96RI1 486 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 RNF2Q99496 336 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 CGREF1Q99674 301 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 CHAC1Q9BUX1 264 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 RAB9BQ9NP90 201 aa4.02□□□□□ -1.77
LINC00649-220ENST00000628906 MRPS16Q9Y3D3 137 aaKnown RBP4.02□□□□□ -1.77
LINC00649-220ENST00000628906 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
LINC00649-220ENST00000628906 TRBV4-1A0A0J9YWV2 114 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 TMEM30CPA0ZSE6 113 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 DBX1A6NMT0 343 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 SNX3O60493 162 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 SPAG7O75391 227 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF254O75437 659 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 HBZP02008 142 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 MT-ND4P03905 459 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 KITP10721 976 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 RPL37AP61513 92 aaKnown RBP4.01□□□□□ -1.77
LINC00649-220ENST00000628906 MICAQ29983 383 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 KLK9Q2XQG4 91 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 LY6G6FQ5SQ64 297 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF773Q6PK81 442 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 IQCF1Q8N6M8 205 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 CCDC107Q8WV48 283 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 C10orf35Q96D05 121 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 LINC01600Q96MT4 127 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 UHRF2Q96PU4 802 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 OR2A7Q96R45 310 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 OR14A2Q96R54 314 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 PHB2Q99623 299 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 C1QTNF4Q9BXJ3 329 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 MROQ9BYG7 248 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 REEP1Q9H902 201 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 SMPXQ9UHP9 88 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 KLK9Q9UKQ9 250 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 RFNGQ9Y644 331 aa4.01□□□□□ -1.77
LINC00649-220ENST00000628906 TRBV7-1A0A0A6YYK4 115 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms