RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 LINC01356Q8N9X3 169 aa12.35□□□□□ -0.43
CBWD1-225ENST00000616944 CCDC71LQ8N9Z2 235 aa12.35□□□□□ -0.43
CBWD1-225ENST00000616944 ST6GALNAC6Q969X2 333 aa12.35□□□□□ -0.43
CBWD1-225ENST00000616944 MSI2Q96DH6 328 aaKnown RBP12.35□□□□□ -0.43
CBWD1-225ENST00000616944 NAA60Q9H7X0 242 aa12.35□□□□□ -0.43
CBWD1-225ENST00000616944 PIPOXQ9P0Z9 390 aa12.35□□□□□ -0.43
CBWD1-225ENST00000616944 TRAV20A0A0B4J274 112 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 ODF3BA8MYP8 253 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 TNFSF12O43508 249 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 TOX4O94842 621 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 HLA-DRB5Q30154 266 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 SGPP2Q8IWX5 399 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 LYG1Q8N1E2 194 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 OR4P4Q8NGL7 312 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 OR13D1Q8NGV5 346 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 ZNF431Q8TF32 576 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-225ENST00000616944 TMEM186Q96B77 213 aa12.34□□□□□ -0.43
CBWD1-225ENST00000616944 RNASEK-C17orf49H0YIS7 233 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 CREBL2O60519 120 aaPredicted RBP12.33□□□□□ -0.43
CBWD1-225ENST00000616944 SFT2D2O95562 160 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 DUS4LO95620 317 aaKnown RBP12.33□□□□□ -0.43
CBWD1-225ENST00000616944 IGHV4-31P0DP07 118 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 VAMP1P23763 118 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 F2RP25116 425 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 CBX3Q13185 183 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 KLRD1Q13241 179 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 ZNF833PQ6ZTB9 187 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 PNKDQ8N490 385 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 TP53RKQ96S44 253 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 OR51J1Q9H342 316 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 HEXA-AS1Q9H8Q6 139 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 GPN1Q9HCN4 374 aaPredicted RBP12.33□□□□□ -0.43
CBWD1-225ENST00000616944 MXRA5Q9NR99 2828 aa12.33□□□□□ -0.43
CBWD1-225ENST00000616944 TEX13DA0A0J9YY54 714 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-225ENST00000616944 LINC00473A8K010 186 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 OR5AC1P0C628 307 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 GATA3P23771 443 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 COX7A1P24310 79 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 S100GP29377 79 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 DUTP33316 252 aaKnown RBP12.33□□□□□ -0.44
CBWD1-225ENST00000616944 BCAP31P51572 246 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 RPL30P62888 115 aaKnown RBP12.33□□□□□ -0.44
CBWD1-225ENST00000616944 LDLRAD2Q5SZI1 272 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 DCAF12L2Q5VW00 463 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 NCR3LG1Q68D85 454 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 FAM71F2Q6NXP2 309 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 KCTD9Q7L273 389 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 OR10X1Q8NGY0 326 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 GLYATL2Q8WU03 294 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 MITD1Q8WV92 249 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 HSD17B10Q99714 261 aaKnown RBP12.33□□□□□ -0.44
CBWD1-225ENST00000616944 PCGF1Q9BSM1 259 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 HIF1ANQ9NWT6 349 aa12.33□□□□□ -0.44
CBWD1-225ENST00000616944 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 H0Y980 276 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 IFNA2P01563 188 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 PRRX1P54821 245 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 BRWD1-AS2P59051 145 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 LINC00205P59089 165 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 TMEM187Q14656 261 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 ANKRD55Q3KP44 614 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 ZNF66Q6ZN08 573 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 CIARTQ8N365 385 aaPredicted RBP12.32□□□□□ -0.44
CBWD1-225ENST00000616944 TMEM222Q9H0R3 208 aa12.32□□□□□ -0.44
CBWD1-225ENST00000616944 DBX1A6NMT0 343 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 LY6LH3BQJ8 138 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 TOR1AO14656 332 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 UCP1P25874 307 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 DIAPH2-AS1Q14236 149 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 SLC9A3R2Q15599 337 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 OR51H1Q8NH63 302 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 CHAC2Q8WUX2 184 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 DDB2Q92466 427 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 S1PR3Q99500 378 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
CBWD1-225ENST00000616944 PRR13Q9NZ81 148 aa12.31□□□□□ -0.44
CBWD1-225ENST00000616944 A0A0B4J2A0 478 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 RNF212BA8MTL3 300 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 M0R1X1 148 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 B3GALNT1O75752 331 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 GZMKP49863 264 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 UBE2E1P51965 193 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 RRAS2P62070 204 aaPredicted RBP12.3□□□□□ -0.44
CBWD1-225ENST00000616944 SP6Q3SY56 376 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 LRTM2Q8N967 370 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 DRAXINQ8NBI3 349 aaPredicted RBP12.3□□□□□ -0.44
CBWD1-225ENST00000616944 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 CASTOR1Q8WTX7 329 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 SHPKQ9UHJ6 478 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 KCNIP3Q9Y2W7 256 aa12.3□□□□□ -0.44
CBWD1-225ENST00000616944 AMMECR1Q9Y4X0 333 aaPredicted RBP12.3□□□□□ -0.44
CBWD1-225ENST00000616944 ARG1P05089 322 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 CT45A6P0DMU7 189 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 CT45A5P0DMU8 189 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 CT45A7P0DMV0 189 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 CATR1Q13166 79 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 ZNF585BQ52M93 769 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 C11orf88Q6PI97 169 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms