RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZNF253O75346 499 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 UMODP07911 640 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 PAX1P15863 534 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.67□□□□□ -1.5
LMO3-235ENST00000616247 ABLIM2Q6H8Q1 611 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 KIR2DL5AQ8N109 375 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 ARL6IP6Q8N6S5 226 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 STPG4Q8N801 248 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 ZNF441Q8N8Z8 693 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 ZDHHC16Q969W1 377 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 PYGO2Q9BRQ0 406 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
LMO3-235ENST00000616247 HINT2Q9BX68 163 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 MRPS18CQ9Y3D5 142 aaKnown RBP5.67□□□□□ -1.5
LMO3-235ENST00000616247 WIPI2Q9Y4P8 454 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 DEGS1O15121 323 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 CTXN2P0C2S0 81 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 SOX8P57073 446 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 OR8B8Q15620 311 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 SPATA46Q5T0L3 261 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 MRPL54Q6P161 138 aaKnown RBP5.67□□□□□ -1.5
LMO3-235ENST00000616247 LINC01551Q86U37 167 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 FGFRL1Q8N441 504 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 SPACA9Q96E40 222 aaPredicted RBP5.67□□□□□ -1.5
LMO3-235ENST00000616247 FOXB1Q99853 325 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 AKIRIN1Q9H9L7 192 aaPredicted RBP5.67□□□□□ -1.5
LMO3-235ENST00000616247 ZFP30Q9Y2G7 519 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 DNAJC13O75165 2243 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 A0A0J9YW62 118 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 LILRA5A6NI73 299 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 A8MXE2 369 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 ZG16O60844 167 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 SCRG1O75711 98 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 IGKV1-5P01602 117 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 FRMD6-AS1P0C7T7 363 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 CA6P23280 308 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 HLA-DRB5Q30154 266 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 FAM27BQ5VT28 67 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 C20orf204Q6ZNR8 217 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 OR8I2Q8N0Y5 310 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 FAM58AQ8N1B3 248 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 CPEB3Q8NE35 698 aaKnown RBP5.67□□□□□ -1.5
LMO3-235ENST00000616247 TSTD1Q8NFU3 115 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 SSMEM1Q8WWF3 244 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 NABP1Q96AH0 204 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 BORCS7Q96B45 105 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 SFRP2Q96HF1 295 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 ABHD14BQ96IU4 210 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 GPR35Q9HC97 309 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 ATP23Q9Y6H3 246 aa5.67□□□□□ -1.5
LMO3-235ENST00000616247 TPRP12270 2363 aaKnown RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 IGHV1OR21-1A0A087WYE8 117 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 H0Y8G0 127 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 ETV2O00321 342 aaPredicted RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 TIAF1O95411 115 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 IGHEP01854 428 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 MGST1P10620 155 aaKnown RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 NPPCP23582 126 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 CTSSP25774 331 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 CEACAM8P31997 349 aaPredicted RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 CLDN15P56746 228 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 GNB1P62873 340 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 FXYD3Q14802 87 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 KCNMB1Q16558 191 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 LCN12Q6JVE5 192 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 SLC23A3Q6PIS1 610 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 SYT13Q7L8C5 426 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 C7orf61Q8IZ16 206 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 DNASE2BQ8WZ79 361 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 OR5P3Q8WZ94 311 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 ST6GALNAC6Q969X2 333 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 C10orf35Q96D05 121 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 TMEM147Q9BVK8 224 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 LAMTOR2Q9Y2Q5 125 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 TBL2Q9Y4P3 447 aaKnown RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 PXMP4Q9Y6I8 212 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 ADAMTS9Q9P2N4 1935 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 FER1L5A0AVI2 2057 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 PRRC2CQ9Y520 2896 aaKnown RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 SCO2A0A1W2PP80 73 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 RBFOX2O43251 390 aaKnown RBP eCLIP5.66□□□□□ -1.5
LMO3-235ENST00000616247 GDF9O60383 454 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 ACTL6BO94805 426 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 IGHV3-13P01766 116 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 IGHV3-7P01780 117 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 CCL3P10147 92 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 PAFAH1B2P68402 229 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 LCN2P80188 198 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 MRPS21P82921 87 aaKnown RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 ZNF439Q8NDP4 499 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 UHRF2Q96PU4 802 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 PARD6GQ9BYG4 376 aaPredicted RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 REV3LO60673 3130 aa5.66□□□□□ -1.5
LMO3-235ENST00000616247 SPTBN5Q9NRC6 3674 aaKnown RBP5.66□□□□□ -1.5
LMO3-235ENST00000616247 VPS13AQ96RL7 3174 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 PRSS47A8MTI9 375 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 C17orf112F2Z3M2 114 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 CCL25O15444 150 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 SYNGR4O95473 234 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms