RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PLSCR4Q9NRQ2 329 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 GNG13Q9P2W3 67 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 DSCAMO60469 2012 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 J3QW42 95 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 UBE2KP61086 200 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF718Q3SXZ3 478 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 LILRB2Q8N423 598 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF645Q8N7E2 425 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 RAB40CQ96S21 281 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 ODAMA1E959 279 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 C1QTNF9BB2RNN3 333 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 SPRY3O43610 288 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 IFNA5P01569 189 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 SRP19P09132 144 aaKnown RBP11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 OR2B8PP59922 312 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 SNRPEP62304 92 aaKnown RBP11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 SSX9Q7RTT3 188 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 TGIF2LYQ8IUE0 185 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 LURAP1LQ8IV03 231 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 COMMD1Q8N668 190 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 FAM215AQ9Y5M1 114 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 WSB1Q9Y6I7 421 aa11.76□□□□□ -0.53
PCDHGA3-202ENST00000612467 HCFC1P51610 2035 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 TRAV20A0A0B4J274 112 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZG16O60844 167 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 IGLV1-44P01699 117 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 ADAM5Q6NVV9 412 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 VKORC1L1Q8N0U8 176 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 URGCP-MRPS24S4R325 110 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 OOEPA6NGQ2 149 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 PROP1O75360 226 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 RBMXL2O75526 392 aaKnown RBP11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 MMP9P14780 707 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 COL8A2P25067 703 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 CLDND2Q8NHS1 167 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 NINJ1Q92982 152 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 SLC25A15Q9Y619 301 aa11.75□□□□□ -0.53
PCDHGA3-202ENST00000612467 H3BQ15 152 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 IGKV1D-33P01593 117 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 IGKV1-33P01594 117 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 PRDX2P32119 198 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 SP5Q6BEB4 398 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 MOGAT3Q86VF5 341 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 RAB39BQ96DA2 213 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 MMP24Q9Y5R2 645 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 POLEQ07864 2286 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 KITLGP21583 273 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 MEOX2P50222 304 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 RPS23P62266 143 aaKnown RBP11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 TNFRSF9Q07011 255 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 NANPQ8TBE9 248 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 SCGB1C1Q8TD33 95 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 KIAA1456Q9P272 454 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 ARFGEF3Q5TH69 2177 aa11.74□□□□□ -0.53
PCDHGA3-202ENST00000612467 EDDM3BP56851 147 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 RAB2AP61019 212 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 RPL39P5Q59GN2 51 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 NCR3LG1Q68D85 454 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZADH2Q8N4Q0 377 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 OR2V2Q96R30 315 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 TMPRSS5Q9H3S3 457 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 YLPM1P49750 1951 aaKnown RBP11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 DFFBO76075 338 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 SLC25A6P12236 298 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 CEACAM1P13688 526 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 FAM27E3Q08E93 113 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 SMIM21Q3B7S5 101 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 C15orf54Q8N8G6 183 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 LFNGQ8NES3 379 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 DEFB108BQ8NET1 73 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 DCAF16Q9NXF7 216 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 RCC1LQ96I51 464 aaKnown RBP11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 SH3BGRL2Q9UJC5 107 aa11.73□□□□□ -0.53
PCDHGA3-202ENST00000612467 AHRRA9YTQ3 701 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 SLC31A2O15432 143 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF737O75373 536 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 NDUFS6O75380 124 aaKnown RBP11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF134P52741 427 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 ERVFRD-1P60508 538 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 RAB11AP62491 216 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 TFF3Q07654 80 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 RBMS3Q6XE24 437 aaKnown RBP11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF429Q86V71 674 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms