RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	BET1	O15155	118 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	KCNAB3	O43448	404 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	SSX5	O60225	188 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	CNTFR	P26992	372 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	MMD	Q15546	238 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	ZNF329	Q86UD4	541 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	COMMD1	Q8N668	190 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	OR4F17	Q8NGA8	305 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	OR13F1	Q8NGS4	319 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	OR4F4	Q96R69	305 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	RNF5	Q99942	180 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	HSPB9	Q9BQS6	159 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	FUNDC2	Q9BWH2	189 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	LINC00527	Q9UJ94	153 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	ZNF221	Q9UK13	617 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	NOTCH3	Q9UM47	2321 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	TMEM235	A6NFC5	223 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	NBR2	O15453	112 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	IGF1	P05019	195 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	SMIM18	P0DKX4	95 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	SOX6	P35712	828 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	LSM3	P62310	102 aa	Known RBP	13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	FAM131A	Q6UXB0	335 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	ZNF383	Q8NA42	475 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	R3HDM4	Q96D70	268 aa		13.15	□□□□□ -0.3
CCND3-222	ENST00000612455	RBBP9	O75884	186 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	HLA-DRB1	P01911	266 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	OR8U9	P0C7N5	309 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	C5orf64	Q2M2E5	130 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	WFDC9	Q8NEX5	89 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	OR8U1	Q8NH10	309 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	NUDCD2	Q8WVJ2	157 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	ST6GALNAC5	Q9BVH7	336 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	WASHC3	Q9Y3C0	194 aa		13.14	□□□□□ -0.31
CCND3-222	ENST00000612455	TRAV18	A0A075B6X5	111 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	TFAP2A	P05549	437 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	CTXN2	P0C2S0	81 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	LINC00205	P59089	165 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	GNG2	P59768	71 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	SLC35B1	P78383	322 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	CFHR3	Q02985	330 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	CNIH2	Q6PI25	160 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	RNF152	Q8N8N0	203 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	GON7	Q9BXV9	100 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	DIABLO	Q9NR28	239 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	ZFP57	Q9NU63	452 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	SDHAF2	Q9NX18	166 aa		13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	ZNF107	Q9UII5	783 aa	Predicted RBP	13.13	□□□□□ -0.31
CCND3-222	ENST00000612455	IGHV7-81	A0A0B4J1V7	117 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455	LIN54	Q6MZP7	749 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455	TEX38	Q6PEX7	206 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455	SLC25A46	Q96AG3	418 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455	C5orf30	Q96GV9	206 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455	GINS4	Q9BRT9	223 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455	OR51J1	Q9H342	316 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455	AUNIP	Q9H7T9	357 aa		13.12	□□□□□ -0.31
CCND3-222	ENST00000612455		A0A1W2PRX2	142 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455		M0R1X1	148 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	RRH	O14718	337 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	XRCC3	O43542	346 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	HLA-DQB1	P01920	261 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	NCS1	P62166	190 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	RPL23A	P62750	156 aa	Known RBP	13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	ANKRD13B	Q86YJ7	626 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	PDPN	Q86YL7	162 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	KCTD12	Q96CX2	325 aa	Known RBP	13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	OR2D2	Q9H210	308 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	KIAA1456	Q9P272	454 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455	ANXA10	Q9UJ72	324 aa		13.11	□□□□□ -0.31
CCND3-222	ENST00000612455		H7C2Y5	167 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	IGHG4	P01861	327 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	IGKV1-16	P04430	117 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	ELANE	P08246	267 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	PPIF	P30405	207 aa	Known RBP	13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	SLC6A1	P30531	599 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	CRIP2	P52943	208 aa	Predicted RBP	13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	VBP1	P61758	197 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	DEFA6	Q01524	100 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	TAGLN	Q01995	201 aa	Known RBP	13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	FOXE3	Q13461	319 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	PSG5	Q15238	335 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	SAMD5	Q5TGI4	173 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	HOGA1	Q86XE5	327 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	S100A16	Q96FQ6	103 aa	Known RBP	13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	FBXL15	Q9H469	300 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	OR2W1	Q9Y3N9	320 aa		13.1	□□□□□ -0.31
CCND3-222	ENST00000612455	FCN1	O00602	326 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	TUSC2	O75896	110 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	ALDH3B2	P48448	385 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	CTF1	Q16619	201 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	UBE2NL	Q5JXB2	153 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	GVQW1	Q8N7I0	195 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	BEST4	Q8NFU0	473 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	DDB2	Q92466	427 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	FLYWCH2	Q96CP2	140 aa	Known RBP	13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	CMTM3	Q96MX0	182 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms