RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 SAA2P0DJI9 122 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-210ENST00000600286 AADACP22760 399 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 S100GP29377 79 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 FXYD4P59646 89 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 HES1Q14469 280 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 TUSC1Q2TAM9 212 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 LDLRAD2Q5SZI1 272 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF833PQ6ZTB9 187 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 DYNAPQ8N1N2 210 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 ARRDC1Q8N5I2 433 aa13.47□□□□□ -0.25
USHBP1-210ENST00000600286 M0QYG6 137 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 TIMM23O14925 209 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 IGHV4-59P01825 116 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 CRYBA1P05813 215 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 CD1BP29016 333 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 MC5RP33032 325 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 TAGLNQ01995 201 aaKnown RBP13.46□□□□□ -0.25
USHBP1-210ENST00000600286 CBX3Q13185 183 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 SLC9A3R2Q15599 337 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-210ENST00000600286 LIAT1Q6ZQX7 453 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 THNSL2Q86YJ6 484 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 DRAM1Q8N682 238 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 ZNF645Q8N7E2 425 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 ZBTB34Q8NCN2 500 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 SPATA3Q8NHX4 192 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 SECTM1Q8WVN6 248 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 DEDD2Q8WXF8 326 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 ADTRPQ96IZ2 230 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 AKR1E2Q96JD6 320 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 WDR12Q9GZL7 423 aaKnown RBP13.46□□□□□ -0.25
USHBP1-210ENST00000600286 SRRQ9GZT4 340 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 SLC5A7Q9GZV3 580 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 FBN3Q75N90 2809 aa13.46□□□□□ -0.25
USHBP1-210ENST00000600286 ANK2Q01484 3957 aa13.46□□□□□ -0.26
USHBP1-210ENST00000600286 ANKRD20A5PA0PJZ0 165 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 M0R1X1 148 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 APOA2P02652 100 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 CD74P04233 296 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 AMY2AP04746 511 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 PAX6P26367 422 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 RAB13P51153 203 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 DIAPH2-AS1Q14236 149 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 ZNF846Q147U1 533 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 ZNF79Q15937 498 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 RPL39P5Q59GN2 51 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 C16orf87Q6PH81 154 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 ODF3L1Q8IXM7 274 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 CMTM1Q8IZ96 169 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 SCP2D1Q9UJQ7 156 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 VPREB3Q9UKI3 123 aa13.45□□□□□ -0.26
USHBP1-210ENST00000600286 A0A1W2PPI3 338 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 CENPXA8MT69 81 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 ECI1P42126 302 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 UBA52P62987 128 aaKnown RBP13.44□□□□□ -0.26
USHBP1-210ENST00000600286 MSMO1Q15800 293 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 LY6EQ16553 131 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 SCGB2B2Q4G0G5 96 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 OR2T10Q8NGZ9 312 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 OR56B4Q8NH76 319 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 ZFAND2BQ8WV99 257 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 MOB3AQ96BX8 217 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 DUX5Q96PT3 197 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 PRRT1Q99946 306 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 MRPL20Q9BYC9 149 aaKnown RBP13.44□□□□□ -0.26
USHBP1-210ENST00000600286 TINAGL1Q9GZM7 467 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-210ENST00000600286 MCUBQ9NWR8 336 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 SDHAF2Q9NX18 166 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 PRELID3BQ9Y3B1 194 aa13.44□□□□□ -0.26
USHBP1-210ENST00000600286 OR5H14A6NHG9 310 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 H7C2Y5 167 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 VENTXO95231 258 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 RNASE1P07998 156 aaKnown RBP13.43□□□□□ -0.26
USHBP1-210ENST00000600286 PGAM2P15259 253 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 THBS3P49746 956 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 C16orf82Q7Z2V1 217 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 ZDHHC22Q8N966 263 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 TERB2Q8NHR7 220 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 SCGB3A2Q96PL1 93 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 HSD17B10Q99714 261 aaKnown RBP13.43□□□□□ -0.26
USHBP1-210ENST00000600286 NABP2Q9BQ15 211 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 TCF19Q9Y242 345 aa13.43□□□□□ -0.26
USHBP1-210ENST00000600286 IGHV3-72A0A0B4J1Y9 119 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 IGKV1D-13A0A0B4J2D9 117 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 MOSP00540 346 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 SNRNP70P08621 437 aaKnown RBP13.42□□□□□ -0.26
USHBP1-210ENST00000600286 CT45A6P0DMU7 189 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 CT45A5P0DMU8 189 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 CT45A7P0DMV0 189 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 IGKV1-13P0DP09 117 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 RRASP10301 218 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 TMEM11P17152 192 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 CD40LGP29965 261 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 PPP5CP53041 499 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 UCP3P55916 312 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 RPL15P61313 204 aaKnown RBP13.42□□□□□ -0.26
USHBP1-210ENST00000600286 LSAMPQ13449 338 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 RTL8BQ17RB0 113 aa13.42□□□□□ -0.26
USHBP1-210ENST00000600286 ZNF660Q6AZW8 331 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms