RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RORCP51449 518 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 GNG2P59768 71 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 GPR141Q7Z602 305 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 SAMD12Q8N8I0 201 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 C5orf30Q96GV9 206 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 SH2D7A6NKC9 451 aaPredicted RBP13.92□□□□□ -0.18
USHBP1-209ENST00000598570 LINC01548A6NM66 108 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 BET1O15155 118 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 IGF1P05019 195 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 CD28P10747 220 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 CBX5P45973 191 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 RPL5P46777 297 aaKnown RBP13.92□□□□□ -0.18
USHBP1-209ENST00000598570 GPR12P47775 334 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 TMBIM6P55061 237 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 ACTBP60709 375 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 NDUFA11Q86Y39 141 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 ZNF383Q8NA42 475 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 OR5AU1Q8NGC0 362 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 SDHAF2Q9NX18 166 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 ZNF221Q9UK13 617 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 RNF150Q9ULK6 438 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 OR2W1Q9Y3N9 320 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 NOTCH1P46531 2555 aa13.92□□□□□ -0.18
USHBP1-209ENST00000598570 FBXO24O75426 580 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 IGLV2-14P01704 120 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 OR8U9P0C7N5 309 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 ZNF182P17025 639 aaPredicted RBP13.91□□□□□ -0.18
USHBP1-209ENST00000598570 TAGLNQ01995 201 aaKnown RBP13.91□□□□□ -0.18
USHBP1-209ENST00000598570 EIF4EBP1Q13541 118 aaPredicted RBP13.91□□□□□ -0.18
USHBP1-209ENST00000598570 TREML4Q6UXN2 200 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 RNF152Q8N8N0 203 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 OR8U1Q8NH10 309 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 DDB2Q92466 427 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 RBMXL1Q96E39 390 aaKnown RBP13.91□□□□□ -0.18
USHBP1-209ENST00000598570 WASHC3Q9Y3C0 194 aa13.91□□□□□ -0.18
USHBP1-209ENST00000598570 PLXNB1O43157 2135 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 NCBP2LA6PVI3 153 aaKnown RBP13.9□□□□□ -0.18
USHBP1-209ENST00000598570 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 EIF4EP06730 217 aaKnown RBP13.9□□□□□ -0.18
USHBP1-209ENST00000598570 TAS2R20P59543 309 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 CFHR3Q02985 330 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 MSMO1Q15800 293 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 C5orf64Q2M2E5 130 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 C2orf68Q2NKX9 166 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 FAM131AQ6UXB0 335 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 CENPVQ7Z7K6 275 aaPredicted RBP13.9□□□□□ -0.18
USHBP1-209ENST00000598570 BEST4Q8NFU0 473 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 RAB2BQ8WUD1 216 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 CHPT1Q8WUD6 406 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 SNAPC3Q92966 411 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 MMP27Q9H306 513 aa13.9□□□□□ -0.18
USHBP1-209ENST00000598570 ZNF107Q9UII5 783 aaPredicted RBP13.9□□□□□ -0.18
USHBP1-209ENST00000598570 AP4M1O00189 453 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 NBR2O15453 112 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 KCNAB3O43448 404 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 SLC22A5O76082 557 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 CRIP2P52943 208 aaPredicted RBP13.89□□□□□ -0.19
USHBP1-209ENST00000598570 LINC00205P59089 165 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 DHRS11Q6UWP2 260 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 SLC35E3Q7Z769 313 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 PDPNQ86YL7 162 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 COMMD1Q8N668 190 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 GVQW1Q8N7I0 195 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 CITED2Q99967 270 aaPredicted RBP13.89□□□□□ -0.19
USHBP1-209ENST00000598570 RASL11BQ9BPW5 248 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 GINS4Q9BRT9 223 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 ADAM30Q9UKF2 790 aa13.89□□□□□ -0.19
USHBP1-209ENST00000598570 IGKV1-16P04430 117 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 CRYGBP07316 175 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 PTHLHP12272 177 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 ELK1P19419 428 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 CNTFRP26992 372 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 DUTP33316 252 aaKnown RBP13.88□□□□□ -0.19
USHBP1-209ENST00000598570 SOX6P35712 828 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 C19orf54Q5BKX5 351 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 TMEM69Q5SWH9 247 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 ZNF660Q6AZW8 331 aaPredicted RBP13.88□□□□□ -0.19
USHBP1-209ENST00000598570 STPG2Q8N412 459 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 OR5AP2Q8NGF4 316 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 GPX8Q8TED1 209 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 GIMAP1Q8WWP7 306 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 HSPB9Q9BQS6 159 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 OR2D2Q9H210 308 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 COMMD3Q9UBI1 195 aa13.88□□□□□ -0.19
USHBP1-209ENST00000598570 IGHV7-81A0A0B4J1V7 117 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 M0R1X1 148 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 RRHO14718 337 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 SPDEFO95238 335 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 TSPAN15O95858 294 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 SPCS2Q15005 226 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 MMDQ15546 238 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 C10orf99Q6UWK7 81 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 GLDNQ6ZMI3 551 aaPredicted RBP13.87□□□□□ -0.19
USHBP1-209ENST00000598570 OVCH2Q7RTZ1 564 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 LYSMD2Q8IV50 215 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 FOXRED2Q8IWF2 684 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 ZNF645Q8N7E2 425 aa13.87□□□□□ -0.19
USHBP1-209ENST00000598570 DRAXINQ8NBI3 349 aaPredicted RBP13.87□□□□□ -0.19
USHBP1-209ENST00000598570 DYNC2LI1Q8TCX1 351 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms