RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 PYDC2Q56P42 97 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 ZNF660Q6AZW8 331 aaPredicted RBP6.71□□□□□ -1.34
VRK3-211ENST00000596445 LINC00299Q6ZSB3 139 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 TMEM229BQ8NBD8 167 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 OR56B4Q8NH76 319 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 CAPSLQ8WWF8 208 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 MRPL20Q9BYC9 149 aaKnown RBP6.71□□□□□ -1.34
VRK3-211ENST00000596445 RAB18Q9NP72 206 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 TAS2R8Q9NYW2 309 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 PTTG2Q9NZH5 202 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 COL6A5A8TX70 2615 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 IGHV3-72A0A0B4J1Y9 119 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 IGKV1D-13A0A0B4J2D9 117 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 FAM181BA6NEQ2 426 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 PROP1O75360 226 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 PPYP01298 95 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 CD74P04233 296 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 CD3DP04234 171 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 SNRNP70P08621 437 aaKnown RBP6.7□□□□□ -1.34
VRK3-211ENST00000596445 CSF1P09603 554 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 CT45A6P0DMU7 189 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 CT45A5P0DMU8 189 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 CT45A7P0DMV0 189 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 IGKV1-13P0DP09 117 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 AADACP22760 399 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 TAS2R19P59542 299 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 HERV-K104P61576 105 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 LSAMPQ13449 338 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 EBI3Q14213 229 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 HES1Q14469 280 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 RNASE10Q5GAN6 216 aaKnown RBP6.7□□□□□ -1.34
VRK3-211ENST00000596445 VAX1Q5SQQ9 334 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 CCBE1Q6UXH8 406 aaPredicted RBP6.7□□□□□ -1.34
VRK3-211ENST00000596445 C16orf82Q7Z2V1 217 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 TMEM219Q86XT9 240 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 Q8N402 240 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 ZNF645Q8N7E2 425 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 OR6F1Q8NGZ6 308 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 TMEM158Q8WZ71 300 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 NABP2Q9BQ15 211 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 ZNF2Q9BSG1 426 aaPredicted RBP6.7□□□□□ -1.34
VRK3-211ENST00000596445 THAP7Q9BT49 309 aaPredicted RBP6.7□□□□□ -1.34
VRK3-211ENST00000596445 SDHAF2Q9NX18 166 aa6.7□□□□□ -1.34
VRK3-211ENST00000596445 ANKRD20A5PA0PJZ0 165 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 OR5H14A6NHG9 310 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 H0YJW9 148 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 J3QRK9 145 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 M0QYG6 137 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 M0R1X1 148 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 CHST1O43916 411 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 OR2F2O95006 317 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 RAB3DO95716 219 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 MOSP00540 346 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 IGKV1D-33P01593 117 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 IGKV1-33P01594 117 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 IFNA6P05013 189 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 CRYBA1P05813 215 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 AKAIN1P0CW23 69 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 MC5RP33032 325 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 TSPAN5P62079 268 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 TAGLNQ01995 201 aaKnown RBP6.69□□□□□ -1.34
VRK3-211ENST00000596445 ZNF45Q02386 682 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 MEF2DQ14814 521 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 MSMO1Q15800 293 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 KRTAP21-3Q3LHN1 58 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 KRTAP24-1Q3LI83 254 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 STEAP1BQ6NZ63 245 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 TMEM17Q86X19 198 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 ARRDC1Q8N5I2 433 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 GDPD1Q8N9F7 314 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 OR5AN1Q8NGI8 311 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 OR2T10Q8NGZ9 312 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 SECTM1Q8WVN6 248 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 MOB3AQ96BX8 217 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 C5orf30Q96GV9 206 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 EAF1Q96JC9 268 aaPredicted RBP6.69□□□□□ -1.34
VRK3-211ENST00000596445 AKR1E2Q96JD6 320 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 RBM14Q96PK6 669 aaKnown RBP6.69□□□□□ -1.34
VRK3-211ENST00000596445 TINAGL1Q9GZM7 467 aaPredicted RBP6.69□□□□□ -1.34
VRK3-211ENST00000596445 SRRQ9GZT4 340 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 SLC5A7Q9GZV3 580 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 TENM1Q9UKZ4 2725 aa6.69□□□□□ -1.34
VRK3-211ENST00000596445 M0QZK8 103 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 IGLV2-14P01704 120 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 APOA2P02652 100 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 HKR1P10072 659 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 TMEM11P17152 192 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 DUTP33316 252 aaKnown RBP6.68□□□□□ -1.34
VRK3-211ENST00000596445 THBS3P49746 956 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 LINC00205P59089 165 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 FXYD4P59646 89 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 AP3S2P59780 193 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 HNF4GQ14541 408 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 FBLN7Q53RD9 439 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 DHRS7BQ6IAN0 325 aaPredicted RBP6.68□□□□□ -1.34
VRK3-211ENST00000596445 GLDNQ6ZMI3 551 aaPredicted RBP6.68□□□□□ -1.34
VRK3-211ENST00000596445 MFSD4AQ8N468 514 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 Q8N6K4 173 aa6.68□□□□□ -1.34
VRK3-211ENST00000596445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms