RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MMDQ15546 238 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 CNIH2Q6PI25 160 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 FAM71E2Q8N5Q1 922 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 DRAXINQ8NBI3 349 aaPredicted RBP11.53□□□□□ -0.56
VRK3-206ENST00000594090 OR5AN1Q8NGI8 311 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 CMTM3Q96MX0 182 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 GAB2Q9UQC2 676 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 M0R1X1 148 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 IGHG2P01859 326 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 CNTFRP26992 372 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 MC5RP33032 325 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.56
VRK3-206ENST00000594090 C2orf68Q2NKX9 166 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 SLC35E3Q7Z769 313 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 HOGA1Q86XE5 327 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 BEST4Q8NFU0 473 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 OR5AU1Q8NGC0 362 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 RAB2BQ8WUD1 216 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 AP3S1Q92572 193 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 C5orf30Q96GV9 206 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 RITA1Q96K30 269 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 RASL11BQ9BPW5 248 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 SDHAF2Q9NX18 166 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.56
VRK3-206ENST00000594090 RBM7Q9Y580 266 aaKnown RBP11.52□□□□□ -0.56
VRK3-206ENST00000594090 MEIS3P1A6NDR6 274 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 H7C2Y5 167 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 NBR2O15453 112 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 HPGDSO60760 199 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 ZNF182P17025 639 aaPredicted RBP11.52□□□□□ -0.57
VRK3-206ENST00000594090 NFYAP23511 347 aaPredicted RBP11.52□□□□□ -0.57
VRK3-206ENST00000594090 CBX5P45973 191 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 LINC00205P59089 165 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 SPCS2Q15005 226 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 MZT2AQ6P582 158 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 CENPVQ7Z7K6 275 aaPredicted RBP11.52□□□□□ -0.57
VRK3-206ENST00000594090 ZNF383Q8NA42 475 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
VRK3-206ENST00000594090 BCL7BQ9BQE9 202 aa11.52□□□□□ -0.57
VRK3-206ENST00000594090 NDUFA3O95167 84 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 TSPAN15O95858 294 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 APOA2P02652 100 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 FCER2P06734 321 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 ELK1P19419 428 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 SOX6P35712 828 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 TMBIM6P55061 237 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 ARPC4P59998 168 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 C10orf99Q6UWK7 81 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 FOXRED2Q8IWF2 684 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 NPBQ8NG41 125 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 NOL4LQ96MY1 436 aaPredicted RBP11.51□□□□□ -0.57
VRK3-206ENST00000594090 IFT46Q9NQC8 304 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 SCOCQ9UIL1 159 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 OR2W1Q9Y3N9 320 aa11.51□□□□□ -0.57
VRK3-206ENST00000594090 LINC01548A6NM66 108 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 KCNAB3O43448 404 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 RBBP9O75884 186 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 HLA-DQB1P01920 261 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 LUMP51884 338 aaPredicted RBP11.5□□□□□ -0.57
VRK3-206ENST00000594090 TREML4Q6UXN2 200 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 NDUFA11Q86Y39 141 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 CHPT1Q8WUD6 406 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 HSPB9Q9BQS6 159 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 NECAP2Q9NVZ3 263 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 ANAPC10Q9UM13 185 aa11.5□□□□□ -0.57
VRK3-206ENST00000594090 IGKV1D-13A0A0B4J2D9 117 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 SMIM31A0A1B0GVY4 71 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 PSMB11A5LHX3 300 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 J3QRK9 145 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 AP4M1O00189 453 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 NOL3O60936 208 aaKnown RBP11.49□□□□□ -0.57
VRK3-206ENST00000594090 TUSC2O75896 110 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 HLA-DRB1P01911 266 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 IGKV1-16P04430 117 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 CSF1P09603 554 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 IGKV1-13P0DP09 117 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 THBS3P49746 956 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 CD83Q01151 205 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 C5orf64Q2M2E5 130 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 STPG2Q8N412 459 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 ZNF645Q8N7E2 425 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 MMP27Q9H306 513 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 SLC35D1Q9NTN3 355 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 KIAA1456Q9P272 454 aa11.49□□□□□ -0.57
VRK3-206ENST00000594090 ZNF107Q9UII5 783 aaPredicted RBP11.49□□□□□ -0.57
VRK3-206ENST00000594090 ADARB2-AS1A8MUL3 147 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 FAM25AB3EWG3 89 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 FAM25CB3EWG5 89 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 FAM25GB3EWG6 89 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 RRHO14718 337 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 PRSS3P35030 304 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 OR5AP2Q8NGF4 316 aa11.48□□□□□ -0.57
VRK3-206ENST00000594090 ISOC1Q96CN7 298 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms