RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ECSCRQ19T08 205 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 PLAC9Q5JTB6 97 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 DCUN1D4Q92564 292 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 GALMQ96C23 342 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 YPEL2Q96QA6 119 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 URM1Q9BTM9 101 aaKnown RBP11.43□□□□□ -0.58
PNKP-202ENST00000593706 MRPL20Q9BYC9 149 aaKnown RBP11.43□□□□□ -0.58
PNKP-202ENST00000593706 YTHDF1Q9BYJ9 559 aaKnown RBP11.43□□□□□ -0.58
PNKP-202ENST00000593706 Q9H521 79 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 ZMAT4Q9H898 229 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 PLEKHJ1Q9NW61 149 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 STEAP1Q9UHE8 339 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 KCNK7Q9Y2U2 307 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 TNCP24821 2201 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
PNKP-202ENST00000593706 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 LYL1P12980 280 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 SPNP16150 400 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 RAB9AP51151 201 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 PSMD7P51665 324 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 C2orf76Q3KRA6 126 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 HES5Q5TA89 166 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 ZNF833PQ6ZTB9 187 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 OR6Q1Q8NGQ2 317 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 ABHD5Q8WTS1 349 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 ARHGAP5-AS1Q96IT6 56 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 PECRQ9BY49 303 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 PARP12Q9H0J9 701 aaKnown RBP11.42□□□□□ -0.58
PNKP-202ENST00000593706 ALX4Q9H161 411 aaPredicted RBP11.42□□□□□ -0.58
PNKP-202ENST00000593706 GHITMQ9H3K2 345 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 RIMS4Q9H426 269 aaPredicted RBP11.42□□□□□ -0.58
PNKP-202ENST00000593706 C12orf4Q9NQ89 552 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 LRRC42Q9Y546 428 aa11.42□□□□□ -0.58
PNKP-202ENST00000593706 SAA2-SAA4A0A096LPE2 208 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 IGHV7-81A0A0B4J1V7 117 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 A0A1W2PN81 502 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 LINC01619G3V211 115 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 RGS11O94810 467 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 SAA2P0DJI9 122 aaPredicted RBP11.41□□□□□ -0.58
PNKP-202ENST00000593706 GP9P14770 177 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 FGF9P31371 208 aaPredicted RBP11.41□□□□□ -0.58
PNKP-202ENST00000593706 CHRNA7P36544 502 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 VEGFCP49767 419 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 SLURP1P55000 103 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 KIAA0141Q14154 515 aaPredicted RBP11.41□□□□□ -0.58
PNKP-202ENST00000593706 PLGLAQ15195 96 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 MOGAT2Q3SYC2 334 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 C22orf42Q6IC83 251 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 LIN54Q6MZP7 749 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 ZNF773Q6PK81 442 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 FCGR1BQ92637 280 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 NABP2Q9BQ15 211 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 Q9N2K0 584 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 A3GALT2U3KPV4 340 aa11.41□□□□□ -0.58
PNKP-202ENST00000593706 A0A0B4J203 849 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 IGKV1-6A0A0C4DH72 117 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 PDCD5O14737 125 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 OR3A3P47888 321 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 HLA-DRB3P79483 266 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 SRSF7Q16629 238 aaKnown RBP eCLIP11.4□□□□□ -0.58
PNKP-202ENST00000593706 OR2AK2Q8NG84 335 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 OR56B1Q8NGI3 324 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 CASTOR1Q8WTX7 329 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 DLX4Q92988 240 aaPredicted RBP11.4□□□□□ -0.58
PNKP-202ENST00000593706 RITA1Q96K30 269 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 AGMATQ9BSE5 352 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 ABRACLQ9P1F3 81 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 RAB22AQ9UL26 194 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
PNKP-202ENST00000593706 DNAH1Q9P2D7 4330 aa11.4□□□□□ -0.58
PNKP-202ENST00000593706 RAB27BO00194 218 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 MFNGO00587 321 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 ITGB1BP1O14713 200 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 LGALS1P09382 135 aaKnown RBP11.39□□□□□ -0.59
PNKP-202ENST00000593706 OR8U9P0C7N5 309 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 RAB3BP20337 219 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 RAB6AP20340 208 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 MYL9P24844 172 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 PSMB9P28065 219 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 PITPNAQ00169 270 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 NDPQ00604 133 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 KCTD21Q4G0X4 260 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 FAM71F2Q6NXP2 309 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 FAM131AQ6UXB0 335 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 MINDY2Q8NBR6 621 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 IL1F10Q8WWZ1 152 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 CHMP1AQ9HD42 196 aaPredicted RBP11.39□□□□□ -0.59
PNKP-202ENST00000593706 TXNL4BQ9NX01 149 aaKnown RBP11.39□□□□□ -0.59
PNKP-202ENST00000593706 OR1A1Q9P1Q5 309 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 SLC23A1Q9UHI7 598 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 STUB1Q9UNE7 303 aa11.39□□□□□ -0.59
PNKP-202ENST00000593706 IGHV4OR15-8A0A075B7B6 117 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 A0A087WW49 117 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 TRIM64CA6NLI5 447 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 NDUFA3O95167 84 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 SCTP09683 121 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 RANBP1P43487 201 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms