RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	RPS19	P39019	145 aa	Known RBP	12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	LSM3	P62310	102 aa	Known RBP	12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	SLC35B1	P78383	322 aa		12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	GLDN	Q6ZMI3	551 aa	Predicted RBP	12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	NPB	Q8NG41	125 aa		12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	OR5AN1	Q8NGI8	311 aa		12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	OR8U1	Q8NH10	309 aa		12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	HSPB9	Q9BQS6	159 aa		12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	ST6GALNAC5	Q9BVH7	336 aa		12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622	GON7	Q9BXV9	100 aa		12.93	□□□□□ -0.34
CIRBP-233	ENST00000591622		H7C2Y5	167 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	GNG2	P59768	71 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	PNLIPRP3	Q17RR3	467 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	COMMD1	Q8N668	190 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	NUDCD2	Q8WVJ2	157 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	GINS4	Q9BRT9	223 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	ZNF107	Q9UII5	783 aa	Predicted RBP	12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	SPATA2	Q9UM82	520 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	GAB2	Q9UQC2	676 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	WASHC3	Q9Y3C0	194 aa		12.92	□□□□□ -0.34
CIRBP-233	ENST00000591622	TRAV18	A0A075B6X5	111 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622		A0A0A6YYH2	397 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622		A6NJ64	397 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	RRP9	O43818	475 aa	Known RBP	12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	SSX5	O60225	188 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	RBBP9	O75884	186 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	NDUFA3	O95167	84 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	HLA-DRB1	P01911	266 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	IGF1	P05019	195 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	TFAP2A	P05549	437 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	C5orf64	Q2M2E5	130 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	KHDC1L	Q5JSQ8	128 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	FUNDC2	Q9BWH2	189 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	OR2D2	Q9H210	308 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	KIAA1456	Q9P272	454 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622	ZNF580	Q9UK33	172 aa		12.91	□□□□□ -0.34
CIRBP-233	ENST00000591622		M0R1X1	148 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	CTXN2	P0C2S0	81 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	PF4V1	P10720	104 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	LINC00205	P59089	165 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	DEFA6	Q01524	100 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	LIN54	Q6MZP7	749 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	TEX38	Q6PEX7	206 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	ZNF383	Q8NA42	475 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	OR13F1	Q8NGS4	319 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	RNF5	Q99942	180 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	DIABLO	Q9NR28	239 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	SDHAF2	Q9NX18	166 aa		12.9	□□□□□ -0.34
CIRBP-233	ENST00000591622	SMIM18	P0DKX4	95 aa		12.89	□□□□□ -0.35
CIRBP-233	ENST00000591622	PDPN	Q86YL7	162 aa		12.89	□□□□□ -0.35
CIRBP-233	ENST00000591622	OR51J1	Q9H342	316 aa		12.89	□□□□□ -0.35
CIRBP-233	ENST00000591622	ZFP57	Q9NU63	452 aa		12.89	□□□□□ -0.35
CIRBP-233	ENST00000591622	ANXA10	Q9UJ72	324 aa		12.89	□□□□□ -0.35
CIRBP-233	ENST00000591622	RBM7	Q9Y580	266 aa	Known RBP	12.89	□□□□□ -0.35
CIRBP-233	ENST00000591622	WNK1	Q9H4A3	2382 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	CMYA5	Q8N3K9	4069 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	IGHV7-81	A0A0B4J1V7	117 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	RRH	O14718	337 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	APOA2	P02652	100 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	IGKV1-16	P04430	117 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	VDAC1	P21796	283 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	NCS1	P62166	190 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	RPL23A	P62750	156 aa	Known RBP	12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	CFHR3	Q02985	330 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	CNIH2	Q6PI25	160 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	SLC25A46	Q96AG3	418 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	S100A16	Q96FQ6	103 aa	Known RBP	12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	FBXL15	Q9H469	300 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	AUNIP	Q9H7T9	357 aa		12.88	□□□□□ -0.35
CIRBP-233	ENST00000591622	IGHG4	P01861	327 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	OR5H8	P0DN80	308 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	VBP1	P61758	197 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	FOXE3	Q13461	319 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	PSG5	Q15238	335 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	UBE2NL	Q5JXB2	153 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	C1QL4	Q86Z23	238 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	SAMD12	Q8N8I0	201 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	RNF152	Q8N8N0	203 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	WFDC9	Q8NEX5	89 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	FLYWCH2	Q96CP2	140 aa	Known RBP	12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	C5orf30	Q96GV9	206 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	TSNAX	Q99598	290 aa	Known RBP	12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	PARP11	Q9NR21	331 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622	OR2W1	Q9Y3N9	320 aa		12.87	□□□□□ -0.35
CIRBP-233	ENST00000591622		G3V4G9	280 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	FCN1	O00602	326 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	ATP6V0E1	O15342	81 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	XRCC3	O43542	346 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	PF4	P02776	101 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	ELANE	P08246	267 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	NFYA	P23511	347 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	SLC6A1	P30531	599 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	THBS3	P49746	956 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	RPS16	P62249	146 aa	Known RBP	12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	TAGLN	Q01995	201 aa	Known RBP	12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	PLGLA	Q15195	96 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.86	□□□□□ -0.35

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