RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	VBP1	P61758	197 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	MRPS15	P82914	257 aa	Known RBP	13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	CFHR3	Q02985	330 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	STPG2	Q8N412	459 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	SLC25A46	Q96AG3	418 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	ST6GALNAC5	Q9BVH7	336 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	DCSTAMP	Q9H295	470 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	GHITM	Q9H3K2	345 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	GAB2	Q9UQC2	676 aa		13.62	□□□□□ -0.23
MBD1-221	ENST00000589867	PSMB11	A5LHX3	300 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	TMEM127	O75204	238 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	SCGN	O76038	276 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	OR8U9	P0C7N5	309 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	TALDO1	P37837	337 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	MMD	Q15546	238 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	CTF1	Q16619	201 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	OR8U1	Q8NH10	309 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	OR10J5	Q8NHC4	309 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	AUNIP	Q9H7T9	357 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	SDHAF2	Q9NX18	166 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867	TNC	P24821	2201 aa		13.61	□□□□□ -0.23
MBD1-221	ENST00000589867		A0A0A6YYH2	397 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	IGHV7-81	A0A0B4J1V7	117 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	OR5H14	A6NHG9	310 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867		A6NJ64	397 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	GABARAP	O95166	117 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	OPN1MW	P04001	364 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	IGKV1-16	P04430	117 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	OPN1MW2	P0DN77	364 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	OPN1MW3	P0DN78	364 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	NDP	Q00604	133 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	C5orf64	Q2M2E5	130 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	C18orf65	Q6ZTR6	163 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	ANKRD13B	Q86YJ7	626 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	GVQW1	Q8N7I0	195 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	CHPT1	Q8WUD6	406 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	PHF21A	Q96BD5	680 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	RASL11B	Q9BPW5	248 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867	OR2D2	Q9H210	308 aa		13.6	□□□□□ -0.23
MBD1-221	ENST00000589867		A0A1W2PRX2	142 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	TCRBV4S1A1T	A0A5B7	111 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	NBR2	O15453	112 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	IGLV2-14	P01704	120 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	HLA-DRB1	P01911	266 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	GNG2	P59768	71 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	PITPNA	Q00169	270 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	CROCCP3	Q8IVE0	287 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	ZNF221	Q9UK13	617 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	WASHC3	Q9Y3C0	194 aa		13.59	□□□□□ -0.23
MBD1-221	ENST00000589867	IGKV1D-13	A0A0B4J2D9	117 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867		M0R1X1	148 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	AP4M1	O00189	453 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	FCN1	O00602	326 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	XRCC3	O43542	346 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	IGF1	P05019	195 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	IGKV1-13	P0DP09	117 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	SOX6	P35712	828 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	CNIH2	Q6PI25	160 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	FOXRED2	Q8IWF2	684 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	OR4X2	Q8NGF9	303 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	R3HDM4	Q96D70	268 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	MRPS26	Q9BYN8	205 aa	Known RBP	13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	FBXL15	Q9H469	300 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	ANXA10	Q9UJ72	324 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	ZNF580	Q9UK33	172 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	FBXO7	Q9Y3I1	522 aa		13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.58	□□□□□ -0.24
MBD1-221	ENST00000589867	RRH	O14718	337 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	KCNAB3	O43448	404 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	TUSC2	O75896	110 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	EIF4E	P06730	217 aa	Known RBP	13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	EGR2	P11161	476 aa	Predicted RBP	13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	NFYA	P23511	347 aa	Predicted RBP	13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	MC5R	P33032	325 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	C19orf54	Q5BKX5	351 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	UBE2NL	Q5JXB2	153 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	ETV3L	Q6ZN32	361 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	LCNL1	Q6ZST4	164 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	HOGA1	Q86XE5	327 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	SAMD12	Q8N8I0	201 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	RNF152	Q8N8N0	203 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	DDB2	Q92466	427 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	SNAPC3	Q92966	411 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	GINS4	Q9BRT9	223 aa		13.57	□□□□□ -0.24
MBD1-221	ENST00000589867	LINC00473	A8K010	186 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	ATP6V0E1	O15342	81 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	IGLV2-23	P01705	113 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	HLA-DQB1	P01920	261 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	PPIF	P30405	207 aa	Known RBP	13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	SSBP2	P81877	361 aa	Predicted RBP	13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	GPR107	Q5VW38	600 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	BEST4	Q8NFU0	473 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	KCTD12	Q96CX2	325 aa	Known RBP	13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	OR51J1	Q9H342	316 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	DIABLO	Q9NR28	239 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	TPSG1	Q9NRR2	321 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	ANAPC10	Q9UM13	185 aa		13.56	□□□□□ -0.24
MBD1-221	ENST00000589867	OR2W1	Q9Y3N9	320 aa		13.56	□□□□□ -0.24

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