RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 A1L4Q6 167 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 RIPPLY2Q5TAB7 128 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 RHBDD2Q6NTF9 364 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 VASH2Q86V25 355 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 RASL10BQ96S79 203 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 HIST1H2BLQ99880 126 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 PHF7Q9BWX1 381 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 TRGV5A0A0B4J1U4 118 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 LOC107984156A0A0G2JMH3 177 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 IL11RAQ14626 422 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 SAMD13Q5VXD3 122 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 ARL17AQ8IVW1 177 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 ZNF721Q8TF20 911 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 APOBEC4Q8WW27 367 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 RPEQ96AT9 228 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 RTBDNQ9BSG5 229 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 ZNF716A6NP11 495 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 NDUFA2O43678 99 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 KIR2DL1P43626 348 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 KIR2DL2P43627 348 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 PRRX1P54821 245 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 SELENOTP62341 195 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 SLC25A47Q6Q0C1 308 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 MIA3Q5JRA6 1907 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 CCL7P80098 99 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 TNXAQ16473 311 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 FAM216AQ8WUB2 273 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 C14orf144Q96I85 54 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 KCNS1Q96KK3 526 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 RASL11BQ9BPW5 248 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 TRAV39A0A0B4J263 110 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 OR8B2Q96RD0 313 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 SLX1AQ9BQ83 275 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 OTX1P32242 354 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 FXYD3Q14802 87 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 WNT10AQ9GZT5 417 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 CLDN14O95500 239 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 ARF6P62330 175 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 HIST1H4GQ99525 98 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 TMEM106BQ9NUM4 274 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 TMEM242Q9NWH2 141 aa12.61□□□□□ -0.39
SMARCA4-214ENST00000589677 DLEU1O43261 78 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 NUDT3O95989 172 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 IGHMP01871 453 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 MPZP25189 248 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 SRSF5Q13243 272 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 ZXDCQ2QGD7 858 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 LRRC75BQ2VPJ9 315 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 SFXN3Q9BWM7 321 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 AMMECR1Q9Y4X0 333 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 EPHA8P29322 1005 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 ICAM4Q14773 271 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 FBLN7Q53RD9 439 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 SLC25A28Q96A46 364 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 GABRG3Q99928 467 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 LOXL2Q9Y4K0 774 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 LRRC37AA6NMS7 1700 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 FOXS1O43638 330 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 HYPMO75409 117 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 IGHV3-13P01766 116 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 IGHV3-7P01780 117 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 UNC119Q13432 240 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 FHL5Q5TD97 284 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 C1orf53Q5VUE5 145 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 THY1P04216 161 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 SAXO1Q8IYX7 474 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 COL4A5P29400 1685 aa12.6□□□□□ -0.39
SMARCA4-214ENST00000589677 IGKV1D-42A0A075B6H8 117 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 TBX6O95947 436 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 ADRA2AP08913 450 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 CD40P25942 277 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 MEOX1P50221 254 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 HIGD1AQ9Y241 93 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 TMEM189A5PLL7 270 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 NDUFS6O75380 124 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 COX6CP09669 75 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 BMI1P35226 326 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 TRA2AQ13595 282 aaKnown RBP eCLIP12.59□□□□□ -0.398e-8■■■□□ 15.5
SMARCA4-214ENST00000589677 ZNF818PQ6ZRF7 136 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 WFDC8Q8IUA0 241 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 URB1O60287 2271 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 M0R3E3 92 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 SNRPCP09234 159 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 CRYBB3P26998 211 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 GPX4P36969 197 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 MRPL52Q86TS9 123 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 QSER1Q2KHR3 1735 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 C8orf88P0DMB2 117 aa12.59□□□□□ -0.39
SMARCA4-214ENST00000589677 GRAMD2BQ96HH9 432 aa12.58□□□□□ -0.39
SMARCA4-214ENST00000589677 CKS2P33552 79 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms