RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 ZNF785A8K8V0 405 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SELEP16581 610 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CD81P60033 236 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ERVFRD-1P60508 538 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SLC35A1P78382 337 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 RUNX1Q01196 453 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 EIF3IQ13347 325 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NSUN5P2Q63ZY6 315 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TMEM123Q8N131 208 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PIGCQ92535 297 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 LHX4Q969G2 390 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IGKV1-12A0A0C4DH73 117 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PINLYPA6NC86 204 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GJE1A6NN92 205 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 H3BP45 60 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NKX2-8O15522 239 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DHHO43323 396 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 MT-CO2P00403 227 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IGKV1D-12P01611 117 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SNCAP37840 140 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PAX5Q02548 391 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PTH2Q96A98 100 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SPRY4Q9C004 299 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 HDGFL3Q9Y3E1 203 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IGF2RP11717 2491 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PRR14LQ5THK1 2151 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IGHV3-64DA0A0J9YX35 117 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CRYM-AS1A6NIL9 109 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PHOX2AO14813 284 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PDE6DO43924 150 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 JTBO76095 146 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR7C1O76099 320 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR10J4P0C629 311 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CCL1P22362 96 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DSCR4P56555 118 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 Q6ZPA2 131 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 UBALD1Q8TB05 177 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 HS3ST6Q96QI5 342 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TP53RKQ96S44 253 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NELFAQ9H3P2 528 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IL36RNQ9UBH0 155 aa9.88□□□□□ -0.83
CDK5RAP3-231ENST00000584063 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 AP4M1O00189 453 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CXCL13O43927 109 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DFFBO76075 338 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 LYL1P12980 280 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NPBWR2P48146 333 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SULT1A1P50225 295 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 LCN2P80188 198 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CT83Q5H943 113 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GJC3Q8NFK1 279 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR10AD1Q8NGE0 317 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF442Q9H7R0 627 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FBLN5Q9UBX5 448 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DOCK11Q5JSL3 2073 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NKX2-6A6NCS4 301 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FOXI3A8MTJ6 420 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CDIPTO14735 213 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FOLR2P14207 255 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CCL11P51671 97 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GRB2P62993 217 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GNMTQ14749 295 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR1C1Q15619 314 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 INO80CQ6PI98 192 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SLC35G3Q8N808 338 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 MOB1AQ9H8S9 216 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 MSL2Q9HCI7 577 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PARP11Q9NR21 331 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ST3GAL6Q9Y274 331 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CHD8Q9HCK8 2581 aa9.87□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CEACAM18A8MTB9 384 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 C21orf140B9A014 251 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SSSCA1O60232 199 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 MDKP21741 143 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 AADACP22760 399 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CXorf66Q5JRM2 361 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR4S2Q8NH73 311 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OCC1Q8TAD7 63 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TMEM54Q969K7 222 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 Q96M66 194 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 KCNJ16Q9NPI9 418 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GAR1Q9NY12 217 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TIMM10BQ9Y5J6 103 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF587BE7ETH6 402 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 H0YL77 283 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 K7ERU9 68 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PPIAL4GP0DN37 164 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF32P17041 273 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 RAB5AP20339 215 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 EPHA1P21709 976 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SSTR5P35346 364 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FOXG1P55316 489 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CLDN15P56746 228 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PLGLB1Q02325 96 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TMEM187Q14656 261 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms