RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TSPAN4O14817 238 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ARPC1BO15143 372 aaKnown RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 LANCL1O43813 399 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 SOX15O60248 233 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 OR7C1O76099 320 aaPredicted RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 IGLV1-51P01701 117 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 HLA-DRB1P01911 266 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 LGALS1P09382 135 aaKnown RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 IGHV3-43DP0DP04 118 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ARSBP15848 533 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ZNF19P17023 458 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 RAB3AP20336 220 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ACTBP60709 375 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 PITPNAQ00169 270 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 DYRK1AQ13627 763 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ALKBH1Q13686 389 aaKnown RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 IL18Q14116 193 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 NHLRC3Q5JS37 347 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ATAD3CQ5T2N8 411 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ZNF660Q6AZW8 331 aaPredicted RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 KDM4DQ6B0I6 523 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ZNF529Q6P280 563 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 KCTD9Q7L273 389 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ZNF439Q8NDP4 499 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 OR10K1Q8NGX5 313 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 OR52N1Q8NH53 320 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 DSCAML1Q8TD84 2053 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 TNFAIP8L1Q8WVP5 186 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 PELI1Q96FA3 418 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 CPNE2Q96FN4 548 aaPredicted RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 GPER1Q99527 375 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ZNF251Q9BRH9 671 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 TINAGL1Q9GZM7 467 aaPredicted RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 PARP11Q9NR21 331 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ZNF581Q9P0T4 197 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ENOPH1Q9UHY7 261 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 ING4Q9UNL4 249 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 STRAPQ9Y3F4 350 aaKnown RBP4.08□□□□□ -1.76
VAPA-207ENST00000583879 NUBP2Q9Y5Y2 271 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 STAB2Q8WWQ8 2551 aa4.08□□□□□ -1.76
VAPA-207ENST00000583879 STARD9Q9P2P6 4700 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 C12orf77C9JDV5 145 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 H0Y980 276 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 AIPO00170 330 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 GEMIN2O14893 280 aaKnown RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 NBR2O15453 112 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 SPINT2O43291 252 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 ATP8B1O43520 1251 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 NDUFA3O95167 84 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 CDRT1O95170 752 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 IGHV3-11P01762 117 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 EGR2P11161 476 aaPredicted RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 CNTFRP26992 372 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 BLVRBP30043 206 aaPredicted RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 CRIP2P52943 208 aaPredicted RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 RBM11P57052 281 aaKnown RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 GNGT1P63211 74 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 TMEM267Q0VDI3 215 aaPredicted RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 RAB40BQ12829 278 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 FLOT2Q14254 428 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 C5orf64Q2M2E5 130 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 MPV17LQ2QL34 196 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 TMEM30BQ3MIR4 351 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 MORN2Q502X0 79 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 C19orf54Q5BKX5 351 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 SLC25A30Q5SVS4 291 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 SYT6Q5T7P8 510 aaPredicted RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 LPCAT4Q643R3 524 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 CD200R1LQ6Q8B3 271 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 ZNF497Q6ZNH5 498 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 LINC00596Q86U02 117 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 SLC51BQ86UW2 128 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 HAPLN4Q86UW8 402 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 ODF3L1Q8IXM7 274 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 STX19Q8N4C7 294 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 ACBD7Q8N6N7 88 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 TCTEX1D1Q8N7M0 179 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 ZNF680Q8NEM1 530 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 NPBQ8NG41 125 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 OR10V1Q8NGI7 309 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 OR51A2Q8NGJ7 313 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 CASTOR1Q8WTX7 329 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 MITD1Q8WV92 249 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 TSEN15Q8WW01 171 aaKnown RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 TRUB1Q8WWH5 349 aaKnown RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 C4orf36Q96KX1 117 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 CIB1Q99828 191 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 NABP2Q9BQ15 211 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 JAM3Q9BX67 310 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 CST11Q9H112 138 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 METTL9Q9H1A3 318 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 TUBA4BQ9H853 241 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 RANGRFQ9HD47 186 aaPredicted RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 RAB9BQ9NP90 201 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 OR2S2Q9NQN1 319 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 FAM212BQ9NTI7 297 aaPredicted RBP4.07□□□□□ -1.76
VAPA-207ENST00000583879 IL36GQ9NZH8 169 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 GNG12Q9UBI6 72 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 TRAPPC2LQ9UL33 140 aa4.07□□□□□ -1.76
VAPA-207ENST00000583879 RNF150Q9ULK6 438 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms