RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 CT45A5P0DMU8 189 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 CT45A7P0DMV0 189 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 SPNP16150 400 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 SAA4P35542 130 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 GPR12P47775 334 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 RAG2P55895 527 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 BRWD1-AS2P59051 145 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 BAMBIQ13145 260 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 HABP2Q14520 560 aaPredicted RBP11.04□□□□□ -0.64
ITGB4-209ENST00000583327 RGS21Q2M5E4 152 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 RPL39P5Q59GN2 51 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 FAM120AOSQ5T036 256 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 TPTE2P1Q5T6R2 138 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 DYNAPQ8N1N2 210 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 C17orf50Q8WW18 174 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 RTN4IP1Q8WWV3 396 aaPredicted RBP11.04□□□□□ -0.64
ITGB4-209ENST00000583327 DDB2Q92466 427 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 TMEM230Q96A57 120 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 S1PR3Q99500 378 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 PRDM13Q9H4Q3 707 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 FLVCR2Q9UPI3 526 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 RBM7Q9Y580 266 aaKnown RBP11.04□□□□□ -0.64
ITGB4-209ENST00000583327 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
ITGB4-209ENST00000583327 ANK3Q12955 4377 aaKnown RBP11.04□□□□□ -0.64
ITGB4-209ENST00000583327 NOTCH2Q04721 2471 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 A0A1W2PRD5 423 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 A0A1W2PRF3 423 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 A0A1W2PRM7 423 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 HSD17B6O14756 317 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 GAPDHP04406 335 aaKnown RBP11.03□□□□□ -0.64
ITGB4-209ENST00000583327 PI3P19957 117 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 IL3RAP26951 378 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 DUTP33316 252 aaKnown RBP11.03□□□□□ -0.64
ITGB4-209ENST00000583327 CEACAM3P40198 252 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 LGALS4P56470 323 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 RPL30P62888 115 aaKnown RBP11.03□□□□□ -0.64
ITGB4-209ENST00000583327 RUSC1-AS1Q66K80 236 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 ZNF66Q6ZN08 573 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 SLC25A42Q86VD7 318 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 ADAD2Q8NCV1 583 aaKnown RBP11.03□□□□□ -0.64
ITGB4-209ENST00000583327 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 CHPT1Q8WUD6 406 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 NABP2Q9BQ15 211 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 YAE1D1Q9NRH1 226 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 SLC2A9Q9NRM0 540 aa11.03□□□□□ -0.64
ITGB4-209ENST00000583327 SVEP1Q4LDE5 3571 aa11.02□□□□□ -0.64
ITGB4-209ENST00000583327 IGHV3OR16-10A0A075B7F0 116 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 A0A1W2PPI3 338 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 LINC00473A8K010 186 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 MPPED1O15442 326 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 TXNL1O43396 289 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 PGAM2P15259 253 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 PIGPP57054 158 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 LINC00205P59089 165 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 CCBE1Q6UXH8 406 aaPredicted RBP11.02□□□□□ -0.65
ITGB4-209ENST00000583327 BRD3OSQ6XYD6 125 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 KCTD9Q7L273 389 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 CMTM1Q8IZ96 169 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 OR8H3Q8N146 312 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 ZNF383Q8NA42 475 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 OR5AN1Q8NGI8 311 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 CFHR4Q92496 578 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 HSD17B10Q99714 261 aaKnown RBP11.02□□□□□ -0.65
ITGB4-209ENST00000583327 C20orf85Q9H1P6 137 aa11.02□□□□□ -0.65
ITGB4-209ENST00000583327 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
ITGB4-209ENST00000583327 SOX21Q9Y651 276 aaPredicted RBP11.02□□□□□ -0.65
ITGB4-209ENST00000583327 FLNAP21333 2647 aaKnown RBP11.01□□□□□ -0.65
ITGB4-209ENST00000583327 IGHV1-3A0A0C4DH29 117 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 CRYM-AS1A6NIL9 109 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 VGLL3A8MV65 326 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 M0R1X1 148 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 ARPC1BO15143 372 aaKnown RBP11.01□□□□□ -0.65
ITGB4-209ENST00000583327 H2AFB2P0C5Z0 115 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 EPHA1P21709 976 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 F2RP25116 425 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 DYNLT3P51808 116 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 UBE2MP61081 183 aaKnown RBP11.01□□□□□ -0.65
ITGB4-209ENST00000583327 SUPT4H1P63272 117 aaKnown RBP11.01□□□□□ -0.65
ITGB4-209ENST00000583327 TMEM128Q5BJH2 165 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 PLET1Q6UQ28 207 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 CLEC9AQ6UXN8 241 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 TGIF2LXQ8IUE1 241 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 CENPSQ8N2Z9 138 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 MINDY2Q8NBR6 621 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 GALNT14Q96FL9 552 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 ADTRPQ96IZ2 230 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 GPHA2Q96T91 129 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 MRPL20Q9BYC9 149 aaKnown RBP11.01□□□□□ -0.65
ITGB4-209ENST00000583327 GSX1Q9H4S2 264 aaPredicted RBP11.01□□□□□ -0.65
ITGB4-209ENST00000583327 NUDT15Q9NV35 164 aa11.01□□□□□ -0.65
ITGB4-209ENST00000583327 C14orf166Q9Y224 244 aaKnown RBP11.01□□□□□ -0.65
ITGB4-209ENST00000583327 ABCA1O95477 2261 aa11□□□□□ -0.65
ITGB4-209ENST00000583327 TRAV6A0A075B6T7 132 aa11□□□□□ -0.65
ITGB4-209ENST00000583327 A0A0U1RQK1 487 aa11□□□□□ -0.65
ITGB4-209ENST00000583327 IL5P05113 134 aa11□□□□□ -0.65
ITGB4-209ENST00000583327 VSIG10L2P0DP72 767 aa11□□□□□ -0.65
ITGB4-209ENST00000583327 THBS3P49746 956 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms