RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
MKS1-211ENST00000581761 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
MKS1-211ENST00000581761 GFOD1Q9NXC2 390 aa12.1□□□□□ -0.47
MKS1-211ENST00000581761 CLN8Q9UBY8 286 aa12.1□□□□□ -0.47
MKS1-211ENST00000581761 NSG2Q9Y328 171 aa12.1□□□□□ -0.47
MKS1-211ENST00000581761 POMT1Q9Y6A1 747 aa12.1□□□□□ -0.47
MKS1-211ENST00000581761 TANC2Q9HCD6 1990 aa12.1□□□□□ -0.47
MKS1-211ENST00000581761 TNFRSF13BO14836 293 aaPredicted RBP12.09□□□□□ -0.47
MKS1-211ENST00000581761 IGKV1-39P01597 117 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 IGKV1D-39P04432 117 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 HKR1P10072 659 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 EPHA1P21709 976 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 NKX2-1P43699 371 aaPredicted RBP12.09□□□□□ -0.47
MKS1-211ENST00000581761 LOXL3P58215 753 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
MKS1-211ENST00000581761 MEF2CQ06413 473 aaPredicted RBP12.09□□□□□ -0.47
MKS1-211ENST00000581761 TMEM30BQ3MIR4 351 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 LRRC10Q5BKY1 277 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 LYPD2Q6UXB3 125 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 ZNF66Q6ZN08 573 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 LSM10Q969L4 123 aaKnown RBP12.09□□□□□ -0.47
MKS1-211ENST00000581761 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 CSMD2Q7Z408 3487 aa12.09□□□□□ -0.47
MKS1-211ENST00000581761 A0A0G2JRQ6 117 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 LYNX1G3V0Z9 82 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 ITGB1BP1O14713 200 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 LYNX1P0DP58 116 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 COL8A2P25067 703 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 NFYBP25208 207 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
MKS1-211ENST00000581761 AKR1C2P52895 323 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 RAB14P61106 215 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 ZNF585BQ52M93 769 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 PRAMEF5Q5TYX0 476 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 ALKAL2Q6UX46 152 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 ZNF295-AS1Q8N0V1 137 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 SCARB1Q8WTV0 552 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 H1FXQ92522 213 aaKnown RBP12.08□□□□□ -0.48
MKS1-211ENST00000581761 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 PLEKHA2Q9HB19 425 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 C19orf12Q9NSK7 152 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 TAS2R3Q9NYW6 316 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 LPAR3Q9UBY5 353 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 LINC00312Q9Y6C7 94 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 AKAP9Q99996 3911 aa12.08□□□□□ -0.48
MKS1-211ENST00000581761 OTOGQ6ZRI0 2925 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 A0A1B0GU03 582 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 SLC31A2O15432 143 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 NDUFA2O43678 99 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 GPR137BO60478 399 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 SLC25A6P12236 298 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 PVALBP20472 110 aaPredicted RBP12.07□□□□□ -0.48
MKS1-211ENST00000581761 RAB7AP51149 207 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 RPL31P62899 125 aaKnown RBP12.07□□□□□ -0.48
MKS1-211ENST00000581761 ZNF816Q0VGE8 651 aaPredicted RBP12.07□□□□□ -0.48
MKS1-211ENST00000581761 ZNF273Q14593 569 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 C11orf71Q6IPW1 123 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 SPAG16Q8N0X2 631 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 TCTEX1D1Q8N7M0 179 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 PCNPQ8WW12 178 aaKnown RBP12.07□□□□□ -0.48
MKS1-211ENST00000581761 HSD17B10Q99714 261 aaKnown RBP12.07□□□□□ -0.48
MKS1-211ENST00000581761 AGMATQ9BSE5 352 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 IFI27L2Q9H2X8 130 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 GAL3ST2Q9H3Q3 398 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 KAAG1Q9UBP8 84 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 CTSZQ9UBR2 303 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 PDZD2O15018 2839 aa12.07□□□□□ -0.48
MKS1-211ENST00000581761 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
MKS1-211ENST00000581761 RPS10-NUDT3A0A1W2PQS6 291 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 C17orf98A8MV24 154 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 M0R1X1 148 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 WRBO00258 174 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 DVL1O14640 695 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 FCN3O75636 299 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 P2RY1P47900 373 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 POLR2GP62487 172 aaKnown RBP eCLIP12.06□□□□□ -0.48
MKS1-211ENST00000581761 VAMP2P63027 116 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 DMBX1Q8NFW5 382 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 LEAP2Q969E1 77 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 MAGT1Q9H0U3 335 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 LINC00574Q9H8X3 128 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 CYTL1Q9NRR1 136 aa12.06□□□□□ -0.48
MKS1-211ENST00000581761 POLQO75417 2590 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 A0A1W2PPE3 182 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 LINC00473A8K010 186 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 TAAR5O14804 337 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 SSSCA1O60232 199 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 MMP23AO75900 390 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 ATG12O94817 140 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 NXPH3O95157 252 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 SOD3P08294 240 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 TPT1P13693 172 aaKnown RBP12.05□□□□□ -0.48
MKS1-211ENST00000581761 GNG10P50151 68 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms