RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 MRPS7Q9Y2R9 242 aaKnown RBP16.33■□□□□ 0.2
SNX11-207ENST00000580875 ORC5O43913 435 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 MOSP00540 346 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 ELANEP08246 267 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 LUMP51884 338 aaPredicted RBP16.32■□□□□ 0.2
SNX11-207ENST00000580875 KIR2DS1Q14954 304 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 DEFB136Q30KP8 78 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 Q3ZCU0 254 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 ATAD3CQ5T2N8 411 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 LCNL1Q6ZST4 164 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 OR56B1Q8NGI3 324 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 CCDC107Q8WV48 283 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 ST6GALNAC6Q969X2 333 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 MRPS24Q96EL2 167 aaKnown RBP16.32■□□□□ 0.2
SNX11-207ENST00000580875 S1PR3Q99500 378 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 RASL11BQ9BPW5 248 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 SELENOIQ9C0D9 397 aa16.32■□□□□ 0.2
SNX11-207ENST00000580875 C9orf66Q5T8R8 295 aa16.31■□□□□ 0.2
SNX11-207ENST00000580875 OR8H1Q8NGG4 311 aa16.31■□□□□ 0.2
SNX11-207ENST00000580875 UBALD1Q8TB05 177 aa16.31■□□□□ 0.2
SNX11-207ENST00000580875 NEK7Q8TDX7 302 aa16.31■□□□□ 0.2
SNX11-207ENST00000580875 Q96M66 194 aa16.31■□□□□ 0.2
SNX11-207ENST00000580875 TM2D1Q9BX74 207 aa16.31■□□□□ 0.2
SNX11-207ENST00000580875 TRAV18A0A075B6X5 111 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 IGHV3-43A0A0B4J1X8 118 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 CTDSPLO15194 276 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 TXNL1O43396 289 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 UPK1BO75841 260 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 MT-ND4P03905 459 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 IGHV3-43DP0DP04 118 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 VEGFCP49767 419 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 MRPS10P82664 201 aaKnown RBP16.3■□□□□ 0.2
SNX11-207ENST00000580875 ZNF497Q6ZNH5 498 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 SNX29P2Q8IUI4 249 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 Q8N402 240 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 SDHCQ99643 169 aaPredicted RBP16.3■□□□□ 0.2
SNX11-207ENST00000580875 NICN1Q9BSH3 213 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 LSM4Q9Y4Z0 139 aaKnown RBP16.3■□□□□ 0.2
SNX11-207ENST00000580875 U3KQK5 164 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 RYR3Q15413 4870 aa16.3■□□□□ 0.2
SNX11-207ENST00000580875 ZNF736B4DX44 427 aaPredicted RBP16.29■□□□□ 0.2
SNX11-207ENST00000580875 RAB27BO00194 218 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 IGHG4P01861 327 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 VDAC1P21796 283 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 CFHR3Q02985 330 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 TRIQKQ629K1 86 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 FAM53AQ6NSI3 398 aaPredicted RBP16.29■□□□□ 0.2
SNX11-207ENST00000580875 FAM71E2Q8N5Q1 922 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 OR10R2Q8NGX6 335 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 ABHD1Q96SE0 405 aa16.29■□□□□ 0.2
SNX11-207ENST00000580875 A0A0A6YYD4 124 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 SEC14L6B5MCN3 397 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 ZNF137PP52743 207 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 MOGAT2Q3SYC2 334 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 SLC25A48Q6ZT89 311 aaKnown RBP16.28■□□□□ 0.2
SNX11-207ENST00000580875 FAM89BQ8N5H3 189 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 C4orf3Q8WVX3 66 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 PRR25Q96S07 402 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 HSPB9Q9BQS6 159 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 SPACA1Q9HBV2 294 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 RAB9BQ9NP90 201 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 GNG12Q9UBI6 72 aa16.28■□□□□ 0.2
SNX11-207ENST00000580875 C12orf77C9JDV5 145 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 SLC31A2O15432 143 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 SPINT2O43291 252 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 HLA-DQB1P01920 261 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 IGF1P05019 195 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 IL7P13232 177 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 ECI1P42126 302 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 F2RL1P55085 397 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 TMEM30BQ3MIR4 351 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 ZNF439Q8NDP4 499 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 SMIM4Q8WVI0 70 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 RAB3CQ96E17 227 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 ZNF580Q9UK33 172 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 TRAPPC2LQ9UL33 140 aa16.27■□□□□ 0.2
SNX11-207ENST00000580875 FAM90A10PA6NDY2 464 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 FAM90A7PA6NKC0 464 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 FAM90A23PA8MXZ1 464 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 MCRIP1C9JLW8 97 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 GABARAPH6UMI1 98 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 SOCS1O15524 211 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 GSTZ1O43708 216 aaPredicted RBP16.26■□□□□ 0.19
SNX11-207ENST00000580875 PSMB8P28062 276 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 BLVRBP30043 206 aaPredicted RBP16.26■□□□□ 0.19
SNX11-207ENST00000580875 INPP1P49441 399 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 ZNF134P52741 427 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 FHL3Q13643 280 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 ARL6IP1Q15041 203 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 BAK1Q16611 211 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 RNASE12Q5GAN4 147 aaKnown RBP16.26■□□□□ 0.19
SNX11-207ENST00000580875 C6orf183Q5T699 404 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 AUNIPQ9H7T9 357 aa16.26■□□□□ 0.19
SNX11-207ENST00000580875 RCC2Q9P258 522 aaKnown RBP16.26■□□□□ 0.19
SNX11-207ENST00000580875 GSTP1P09211 210 aaKnown RBP16.25■□□□□ 0.19
SNX11-207ENST00000580875 OR5H8P0DN80 308 aa16.25■□□□□ 0.19
SNX11-207ENST00000580875 HIST1H1DP16402 221 aaKnown RBP16.25■□□□□ 0.19
SNX11-207ENST00000580875 PRSS3P35030 304 aa16.25■□□□□ 0.19
SNX11-207ENST00000580875 CT45A1Q5HYN5 189 aa16.25■□□□□ 0.19
SNX11-207ENST00000580875 NKAPLQ5M9Q1 402 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms