RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 LHFPL5Q8TAF8 219 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 C10orf105Q8TEF2 133 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 C18orf12Q96KH6 178 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 FANCD2OSQ96PS1 177 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 TP53RKQ96S44 253 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 ZNF251Q9BRH9 671 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 OR2D2Q9H210 308 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 GNG12Q9UBI6 72 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 KCNIP3Q9Y2W7 256 aa6.53□□□□□ -1.36
KPNB1-210ENST00000580573 CR1P17927 2039 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 MED13LQ71F56 2210 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 IGHV3-43A0A0B4J1X8 118 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 PIGBOS1A0A0B4J2F0 54 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 TEX13DA0A0J9YY54 714 aaPredicted RBP6.52□□□□□ -1.37
KPNB1-210ENST00000580573 MEX3AA1L020 520 aaKnown RBP6.52□□□□□ -1.37
KPNB1-210ENST00000580573 IGHV1-8P0DP01 117 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 IGHV3-43DP0DP04 118 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 OMGP23515 440 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 GZMKP49863 264 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 DSCR9P59020 149 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 BRWD1-AS2P59051 145 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 SLC9A3R2Q15599 337 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 PRAMEF5Q5TYX0 476 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 FAM71F2Q6NXP2 309 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 ZNF66Q6ZN08 573 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 C1orf122Q6ZSJ8 110 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 LRRC75A-AS1Q8N1F1 130 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 DDB2Q92466 427 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 TNFRSF14Q92956 283 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 HSD17B10Q99714 261 aaKnown RBP6.52□□□□□ -1.37
KPNB1-210ENST00000580573 ABHD14AQ9BUJ0 271 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 SSBP3Q9BWW4 388 aaPredicted RBP6.52□□□□□ -1.37
KPNB1-210ENST00000580573 BPESC1Q9GZL8 116 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 GSX1Q9H4S2 264 aaPredicted RBP6.52□□□□□ -1.37
KPNB1-210ENST00000580573 UNKLQ9H9P5 680 aaKnown RBP6.52□□□□□ -1.37
KPNB1-210ENST00000580573 LIN7CQ9NUP9 197 aaKnown RBP6.52□□□□□ -1.37
KPNB1-210ENST00000580573 SDHAF2Q9NX18 166 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 VPS13CQ709C8 3753 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 ITPR3Q14573 2671 aa6.52□□□□□ -1.37
KPNB1-210ENST00000580573 PRRC2AP48634 2157 aaKnown RBP6.51□□□□□ -1.37
KPNB1-210ENST00000580573 A0A096LNT2 108 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 A0A1W2PPH5 198 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 RNF212BA8MTL3 300 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 A8MV72 311 aaPredicted RBP6.51□□□□□ -1.37
KPNB1-210ENST00000580573 M0R1W7 72 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 GOSR2O14653 212 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 HSD17B6O14756 317 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 SLC31A2O15432 143 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 RBFOX2O43251 390 aaKnown RBP eCLIP6.51□□□□□ -1.37
KPNB1-210ENST00000580573 IGLV1-47P01700 117 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 LIPFP07098 398 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 HNRNPCP07910 306 aaKnown RBP eCLIP6.51□□□□□ -1.377e-7■■■■□ 21.6
KPNB1-210ENST00000580573 P0C879 139 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 RPA2P15927 270 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 S100GP29377 79 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 DUTP33316 252 aaKnown RBP6.51□□□□□ -1.37
KPNB1-210ENST00000580573 GNB2P62879 340 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 ZNF585BQ52M93 769 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 ESCO2Q56NI9 601 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 NMSQ5H8A3 153 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 ZNF833PQ6ZTB9 187 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 LGI3Q8N145 548 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 Q8N7P7 452 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 CLDND2Q8NHS1 167 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 CASTOR1Q8WTX7 329 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 H1FXQ92522 213 aaKnown RBP6.51□□□□□ -1.37
KPNB1-210ENST00000580573 ST6GALNAC6Q969X2 333 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 RAB39BQ96DA2 213 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 MBD6Q96DN6 1003 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 NMES1Q9C002 83 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 BEX4Q9NWD9 120 aaPredicted RBP6.51□□□□□ -1.37
KPNB1-210ENST00000580573 PSG11Q9UQ72 335 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 TMED3Q9Y3Q3 217 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 SESN1Q9Y6P5 492 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 ZANQ9Y493 2812 aa6.51□□□□□ -1.37
KPNB1-210ENST00000580573 HECTD1Q9ULT8 2610 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 SAA2-SAA4A0A096LPE2 208 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 PPIAL4CA0A0B4J2A2 164 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 LINC00473A8K010 186 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 RAB29O14966 203 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 PHF1O43189 567 aaPredicted RBP6.5□□□□□ -1.37
KPNB1-210ENST00000580573 ADAP1O75689 374 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 SAA2P0DJI9 122 aaPredicted RBP6.5□□□□□ -1.37
KPNB1-210ENST00000580573 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 SLC25A6P12236 298 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 ZFP36P26651 326 aaKnown RBP6.5□□□□□ -1.37
KPNB1-210ENST00000580573 ATP5J2P56134 94 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 RPL30P62888 115 aaKnown RBP6.5□□□□□ -1.37
KPNB1-210ENST00000580573 CATR1Q13166 79 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 SP6Q3SY56 376 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 ZFP69Q49AA0 526 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 LIN54Q6MZP7 749 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 NOXA1Q86UR1 476 aa6.5□□□□□ -1.37
KPNB1-210ENST00000580573 SELENOHQ8IZQ5 122 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms