RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 IGHV3-11P01762 117 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 GLAP06280 429 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 ELANEP08246 267 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 GTF2F2P13984 249 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 ARSBP15848 533 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 RAB3BP20337 219 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 VDAC1P21796 283 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 MYL9P24844 172 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 PSMB8P28062 276 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 HTR2CP28335 458 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 PPIFP30405 207 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 SDC2P34741 201 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 SOX6P35712 828 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 RPS19P39019 145 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 RAB9AP51151 201 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 RBM11P57052 281 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 CFHR3Q02985 330 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 IL13RA2Q14627 380 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 GNMTQ14749 295 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 CTF1Q16619 201 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 SRSF7Q16629 238 aaKnown RBP eCLIP2.98□□□□□ -1.93
NUP85-209ENST00000578987 ZNF674Q2M3X9 581 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 SLC22A6Q4U2R8 563 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 MORN2Q502X0 79 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 NHLRC3Q5JS37 347 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 CASC10Q5T4H9 136 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 FAM27D1Q5T7N8 215 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 WDR73Q6P4I2 378 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 TMEM65Q6PI78 240 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 GLIPR1L1Q6UWM5 242 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 GLDNQ6ZMI3 551 aaPredicted RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 ZNF497Q6ZNH5 498 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 SLC16A12Q6ZSM3 486 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 SLC25A48Q6ZT89 311 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 GPR141Q7Z602 305 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 ODF3L1Q8IXM7 274 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 JAGN1Q8N5M9 183 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 FAM71E2Q8N5Q1 922 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 ZNF439Q8NDP4 499 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 OR10A7Q8NGE5 316 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 OR6M1Q8NGM8 313 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 OR8U1Q8NH10 309 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 KCNG3Q8TAE7 436 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 MUC7Q8TAX7 377 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 C4orf3Q8WVX3 66 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 PTX4Q96A99 478 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 DGCR14Q96DF8 476 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 MS4A10Q96PG2 267 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 CLCC1Q96S66 551 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 ATP6V0BQ99437 205 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 GON7Q9BXV9 100 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 NCOR1P1Q9H4R4 102 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 PARP11Q9NR21 331 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 AP5S1Q9NUS5 200 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 PPP1R14DQ9NXH3 145 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 RABL2AQ9UBK7 228 aaPredicted RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 ZMAT5Q9UDW3 170 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 ZNF107Q9UII5 783 aaPredicted RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 ZNF256Q9Y2P7 627 aaPredicted RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 MRPS28Q9Y2Q9 187 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 AK6Q9Y3D8 172 aaKnown RBP2.98□□□□□ -1.93
NUP85-209ENST00000578987 PEX16Q9Y5Y5 336 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 SMAD5-AS1Q9Y6J3 95 aa2.98□□□□□ -1.93
NUP85-209ENST00000578987 IGHV7-81A0A0B4J1V7 117 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 TRAV41A0A0B4J266 112 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 LOC100506127A0A0U1RQW1 187 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 SMIM31A0A1B0GVY4 71 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 A0A1W2PN81 502 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 TMEM14DPA8MWL7 114 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 C12orf77C9JDV5 145 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 ZNF701M0R085 212 aaPredicted RBP2.97□□□□□ -1.93
NUP85-209ENST00000578987 FCN1O00602 326 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 OVOL1O14753 267 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 LDLRAD4O15165 306 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 SPINT2O43291 252 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 SOX15O60248 233 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 CA11O75493 328 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 CRTAPO75718 401 aaPredicted RBP2.97□□□□□ -1.93
NUP85-209ENST00000578987 FRMD6-AS1P0C7T7 363 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 EGR2P11161 476 aaPredicted RBP2.97□□□□□ -1.93
NUP85-209ENST00000578987 CHATP28329 748 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 BLVRBP30043 206 aaPredicted RBP2.97□□□□□ -1.93
NUP85-209ENST00000578987 SLC6A1P30531 599 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 CHRNA7P36544 502 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 PPP1CCP36873 323 aaKnown RBP2.97□□□□□ -1.93
NUP85-209ENST00000578987 OR3A3P47888 321 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 KCNJ3P48549 501 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 RORCP51449 518 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 LINC00205P59089 165 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 ACTBP60709 375 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 QRFPP83859 136 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 PRR20EP86478 221 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 PRR20CP86479 221 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 PRR20DP86480 221 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 PRR20BP86481 221 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 PRR20AP86496 221 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 PAX5Q02548 391 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 ZNF616Q08AN1 781 aa2.97□□□□□ -1.93
NUP85-209ENST00000578987 DCTN2Q13561 401 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms