RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 CPSF4LA6NMK7 179 aaKnown RBP3.94□□□□□ -1.78
PTPRM-208ENST00000578600 LRRN3E7EW58 273 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 F5H5K5 113 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 DCTN6O00399 190 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 KPNA4O00629 521 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-208ENST00000578600 HSD17B6O14756 317 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 SERF1AO75920 110 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 CD14P08571 375 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 ATP6V1B2P21281 511 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 GATA2P23769 480 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-208ENST00000578600 FASP25445 335 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 CDKN2CP42773 168 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 MEOX2P50222 304 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 GPM6AP51674 278 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 RPL31P62899 125 aaKnown RBP3.94□□□□□ -1.78
PTPRM-208ENST00000578600 HIST1H3AP68431 136 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 OR5I1Q13606 314 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 HIST2H3PS2Q5TEC6 136 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 OR52W1Q6IF63 320 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 NANOGP8Q6NSW7 305 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 BAIAP2L2Q6UXY1 529 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 HIST2H3AQ71DI3 136 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 CROCCP2Q86T23 111 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF695Q8IW36 515 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 PGAM4Q8N0Y7 254 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 C4orf33Q8N1A6 199 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF561Q8N587 486 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 Q8N7P7 452 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 TCP10LQ8TDR4 215 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 LRRC29Q8WV35 223 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 RTL8AQ9BWD3 113 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 NIPAL2Q9H841 368 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 GLS2Q9UI32 602 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 NDUFAF1Q9Y375 327 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 CMYA5Q8N3K9 4069 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 ARHGAP32A7KAX9 2087 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 A0A1W2PPE3 182 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 OR5B21A6NL26 309 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 OOSP1A8MZH6 123 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 M0QX08 132 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 UBDO15205 165 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 TPST1O60507 370 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 SLC16A7O60669 478 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 OR2F2O95006 317 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 ARG1P05089 322 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 ACSM4P0C7M7 580 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF823P16415 610 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 GALP22466 123 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 HTR1DP28221 377 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 KIR3DL2P43630 455 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 BLVRAP53004 296 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 PLP1P60201 277 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 FMODQ06828 376 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 IFFO1Q0D2I5 559 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 STX3Q13277 289 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 GNMTQ14749 295 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 KIR2DS1Q14954 304 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 STUMQ69YW2 141 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 LCN8Q6JVE9 175 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 HSD17B13Q7Z5P4 300 aaPredicted RBP3.93□□□□□ -1.78
PTPRM-208ENST00000578600 PPP1R27Q86WC6 154 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 ERI1Q8IV48 349 aaKnown RBP3.93□□□□□ -1.78
PTPRM-208ENST00000578600 OR1M1Q8NGA1 313 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 OR11H6Q8NGC7 330 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF596Q8TC21 504 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 PIFOQ8TCI5 191 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 RORBQ92753 470 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 GTF2H4Q92759 462 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 MAL2Q969L2 176 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 P2RX4Q99571 388 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF184Q99676 751 aaPredicted RBP3.93□□□□□ -1.78
PTPRM-208ENST00000578600 NSRP1Q9H0G5 558 aaKnown RBP3.93□□□□□ -1.78
PTPRM-208ENST00000578600 TLNRD1Q9H1K6 362 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 STAB2Q8WWQ8 2551 aa3.93□□□□□ -1.78
PTPRM-208ENST00000578600 IGHV3-64DA0A0J9YX35 117 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 SMCO3A2RU48 225 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 OR2AT4A6NND4 320 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 EFCAB9A8MZ26 197 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 SEC14L6B5MCN3 397 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 LOC110117498-PIK3R3F6TDL0 507 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 K7N7A8 449 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 M0R135 149 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 RER1O15258 196 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 BCL2L11O43521 198 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 E2F6O75461 281 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 TMEM50AO95807 157 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 CST1P01037 141 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 SEMG1P04279 462 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 GAPDHP04406 335 aaKnown RBP3.92□□□□□ -1.78
PTPRM-208ENST00000578600 CRYGBP07316 175 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 OR5H8P0DN80 308 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 AQP1P29972 269 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 GABRA2P47869 451 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 MRPL19P49406 292 aaKnown RBP3.92□□□□□ -1.78
PTPRM-208ENST00000578600 RAB25P57735 213 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 BLCAPP62952 87 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 MEF2CQ06413 473 aaPredicted RBP3.92□□□□□ -1.78
PTPRM-208ENST00000578600 DYNC1I2Q13409 638 aaKnown RBP3.92□□□□□ -1.78
PTPRM-208ENST00000578600 SMIM21Q3B7S5 101 aa3.92□□□□□ -1.78
PTPRM-208ENST00000578600 KRTAP27-1Q3LI81 207 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms