RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	RNF224	P0DH78	156 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	OR8G1	Q15617	311 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	ACSM6	Q6P461	480 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	VWA1	Q6PCB0	445 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	RPP25L	Q8N5L8	163 aa	Known RBP	12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNF251	Q9BRH9	671 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZGRF1	Q86YA3	2104 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	WNK2	Q9Y3S1	2297 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	PAGE4	O60829	102 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	IGHV3-48	P01763	117 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	FGF7	P21781	194 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	PPP1CB	P62140	327 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	SPRN	Q5BIV9	151 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	LHFPL4	Q7Z7J7	247 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	LRTM2	Q8N967	370 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	SSMEM1	Q8WWF3	244 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	PCGF1	Q9BSM1	259 aa		12.48	□□□□□ -0.41
PRPF8-216	ENST00000577001	IGLV2-14	P01704	120 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	PSG7	Q13046	419 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	P2RY6	Q15077	328 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNF573	Q86YE8	665 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	GAR1	Q9NY12	217 aa	Known RBP	12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	KIAA1456	Q9P272	454 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	OTOGL	Q3ZCN5	2332 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	PPP1R2P9	O14990	202 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	THBS3	P49746	956 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	FOXF2	Q12947	444 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	HES3	Q5TGS1	186 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	ZNF525	Q8N782	197 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	UNKL	Q9H9P5	680 aa	Known RBP	12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	CA11	O75493	328 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	IGHV2-5	P01817	119 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	UCP3	P55916	312 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	RIPPLY2	Q5TAB7	128 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	C16orf82	Q7Z2V1	217 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	OR5A2	Q8NGI9	324 aa		12.47	□□□□□ -0.41
PRPF8-216	ENST00000577001	MDH2	P40926	338 aa	Known RBP	12.46	□□□□□ -0.41
PRPF8-216	ENST00000577001	HMGN3	Q15651	99 aa		12.46	□□□□□ -0.41
PRPF8-216	ENST00000577001	FFAR4	Q5NUL3	377 aa		12.46	□□□□□ -0.41
PRPF8-216	ENST00000577001	TMEM164	Q5U3C3	297 aa		12.46	□□□□□ -0.41
PRPF8-216	ENST00000577001	C5orf30	Q96GV9	206 aa		12.46	□□□□□ -0.41
PRPF8-216	ENST00000577001	C12orf77	C9JDV5	145 aa		12.46	□□□□□ -0.42
PRPF8-216	ENST00000577001		H0Y980	276 aa		12.46	□□□□□ -0.42
PRPF8-216	ENST00000577001	PPIH	O43447	177 aa	Known RBP	12.46	□□□□□ -0.42
PRPF8-216	ENST00000577001	TIMM8A	O60220	97 aa	Predicted RBP	12.46	□□□□□ -0.42
PRPF8-216	ENST00000577001	FAM90A2P	Q658T7	463 aa		12.46	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.46	□□□□□ -0.42
PRPF8-216	ENST00000577001	STRADB	Q9C0K7	418 aa		12.46	□□□□□ -0.42
PRPF8-216	ENST00000577001	FCGR3B	O75015	233 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	ACTL6B	O94805	426 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	SLC35B1	P78383	322 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	RPL39P5	Q59GN2	51 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNRF1	Q8ND25	227 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	TRAV3	A0A0B4J244	114 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	PTBP3	O95758	552 aa	Known RBP	12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	HAND1	O96004	215 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	HBZ	P02008	142 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	SP1	P08047	785 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	RAB5C	P51148	216 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	NINJ1	Q92982	152 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR51I2	Q9H344	312 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	C11orf1	Q9H5F2	150 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	METTL1	Q9UBP6	276 aa	Known RBP	12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	TLN1	Q9Y490	2541 aa	Known RBP	12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	TRGV5	A0A0B4J1U4	118 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	ODAM	A1E959	279 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	BCL2	P10415	239 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	USF2	Q15853	346 aa	Predicted RBP	12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	COLCA1	Q6ZS62	124 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	ABHD12	Q8N2K0	398 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR5D13	Q8NGL4	314 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR13A1	Q8NGR1	328 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	GNG12	Q9UBI6	72 aa		12.45	□□□□□ -0.42
PRPF8-216	ENST00000577001	LOC102723971	A0A1B0GUV8	181 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001		A0A1B0GV90	55 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	LINC00473	A8K010	186 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	IFNA10	P01566	189 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	GZMH	P20718	246 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	IL24	Q13007	206 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	SPSB4	Q96A44	273 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	TAAR9	Q96RI9	348 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	FUT9	Q9Y231	359 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	SRPX	P78539	464 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001		Q6P435	159 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	ZNF66	Q6ZN08	573 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	TCF23	Q7RTU1	214 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR2Z1	Q8NG97	314 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR10G4	Q8NGN3	311 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR10G9	Q8NGN4	311 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	OR10G7	Q8NGN6	311 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	GUCD1	Q96NT3	240 aa		12.44	□□□□□ -0.42
PRPF8-216	ENST00000577001	DVL1	O14640	695 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	IGHV1-2	P23083	117 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	LFNG	Q8NES3	379 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	SNRNP40	Q96DI7	357 aa	Known RBP	12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	TMEM9B	Q9NQ34	198 aa		12.43	□□□□□ -0.42
PRPF8-216	ENST00000577001	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms